查看更多>>摘要：Thecofilosea is a class in Cercozoa (Rhizaria) comprising mainly freshwater-inhabiting algivores. Recently, numerous isolates of thecofilosean amoebae have been cultured and were characterized by an integrated morphological and molecular approach. The captivating spine-bearing taxa in Thecofilosea were not yet molecularly characterized due to being very rare. There are only two known spine-bearing species, Pamphagus armatus and Lecythium spinosum, which were synonymized by Penard in 1902. Due to a morphological difference of those taxa, we discuss here that we disagree with this taxonomical act. We further isolated single cells of Pamphagus armatus directly from their habitat and successfully sequenced their SSU rDNA, which we subjected to phylogenetic analyses. We show that Pamphagus armatus branches within the Rhizaspididae (Tectofilosida, Thecofilosea). Accordingly, we transfer Pamphagus armatus and the assumingly closely related species Lecythium spinosum to Rhizaspis. (c) 2021 Elsevier GmbH. All rights reserved.
查看更多>>摘要：Until recently, it seemed that amoebae of the genus Thecamoeba could be reliably identified using light-microscopic char-acters. However, recent studies show the presence of sibling species in the genus Thecamoeba, which can only be reliably distinguished based on the molecular data. Here we describe a new freshwater species, Thecamoeba vumurta n. sp., which has minor morphological differences in the light-microscopy and the cell ultrastructure with the widely distributed species Thecamoeba striata. Taken alone, these differences are hardly sufficient to justify a new species, but considerable differences in the SSU rRNA gene sequence leave no doubts that this is an independent species, forming a pair of sibling species with T. striata. The SSU gene sequence in both these species is very divergent from other thecamoebids. BLAST search identifies neither of these sequences as belonging to Thecamoeba. This study further supports the conclusion that gene sequencing is necessary for the reliable identification of Thecamoeba species. To clarify the situation with sibling species, we propose distinguishing three morphologically defined species groups within the genus Thecamoeba and using their names (instead of taxonomic species names) in case a similar species is identified without molecular studies. (c) 2022 Elsevier GmbH. All rights reserved.
查看更多>>摘要：In the course of the last decades, several acanthoecid choanoflagellates have been assigned to the tectiform reproducing genus Stephanoeca based on lorica morphological comparability. The recent description of a Stephanoeca-like nudiform genus, Enibas Schiwitza, Arndt and Nitsche, 2019, has emphasized the possibility that some species assigned to Stephanoeca (based solely on lorica morphological features) might in the end have to be relegated to other genera. Stephanoeca urnula Thomsen, 1973, shows a striking morphological resemblance to E. thessalia Schiwitza and Nitsche, 2020. Also, the inability to document from microscopy any bundles of supernumerary costal strips in the collar region of this species, makes it an obvious Stephanoeca outcast candidate. We have revisited the S. urnula type locality and established this species in crude culture. A detailed SEM morphological analysis of cultured specimens, and a molecular analysis of the SSU and LSU rRNA, has unveiled its undisputed affiliation to the nudiform genus Enibas. Here, we redescribe S. urnula Thomsen, 1973 as E. urnula (Thomsen, 1973) comb. nov. Based on microscopical examinations of species of Stephanoeca and Enibas we have been able to pinpoint anterior lorica chamber construction details, that in the future renders possible a morphological distinction between the two genera. (c) 2022 Elsevier GmbH. All reserved.
查看更多>>摘要：The present study aims to identify epiphytic Ostreopsis cells collected in Guadeloupe between 2017 and 2018 using a morpho-molecular approach. This method combined microscopical observations of wild specimens (light and scanning electron microscopy) with a phylogenetic analysis inferred from concatenated sequences of ribosomal operon (SSU + ITS + LSU) of Ostreopsidoideae. Four distinct morphotypes were identified in our samples and studied by SEM. Molecular data obtained from single-cell PCR for the four morphotypes were consistent with observations and confirmed the presence of three Ostreopsis species resolved in well characterized genotypes (O. cf. ovata, O. lenticularis and O. siamensis) and an unidentified clade. Detailed morphological characters including sulcal plates confirmed the identification of the last morphotype as O. heptagona D.R. Norris, J.W. Bomber & Balech, which forms a new basal clade in the genus, not previously reported. Observations highlighted overlapping sizes for O. lenticularis, O. siamensis and O. heptagona. Direct sequencing of PCR products obtained for some cells of O. lenticularis and O. heptagona collected at one site revealed unexpectedly the presence of the parasitoid dinoflagellate Amoebophrya. Some Ostreopsis cells were found partially emptied and exhibiting a compact mass. Further analyses are needed to understand the ecological role of Amoebophrya on blooms of epiphytic Ostreopsis species. (c) 2022 Elsevier GmbH. All rights reserved.
查看更多>>摘要：Testate amoebae are a polyphyletic assemblage of unicellular eukaryotes with a specific shell. They occur frequently in soil and freshwater habitats all over the world, important for ecosystem functioning and useful for bio-indication. Terrestrial amoeba data from Borneo or Malaysia are rarely available. In this study, data on species composition and relative abundance were presented along a transect from 1730 m up to 4000 m above sea level from 10 elevational levels on Mt. Kinabalu, Malaysian Borneo. In total 78 morphotypes of testate amoebae were recorded. Most were small (under 100 mu m) and supposedly cosmopolitan. However, Certesella certesi with limited geographical distribution and some rare taxa (e.g., Padaungiella lageniformis cordiformis, Placocista jurassica, Trinema chardezi) and two undescribed morphospecies were also observed. Presence/absence and relative abundance data of testate amoebae were associated to elevation with a pronounced change at the tree line, as revealed by non-metric multidimensional scaling ordination analysis. Our data from Southeast Asia contribute to the actual discussion on distributional patterns considering elevation gradients and biogeography of eukaryotic microbes.(c) 2022 Elsevier GmbH. All rights reserved.
Silva-Neto, Inacio D.Sales, Marcelo H. O.Soares, Carlos A. G.Paiva, Thiago S....
18页
查看更多>>摘要：Copemetopus Villeneuve-Brachon, 1940 is a rare, poorly known sapropelic ciliate genus composed of only two valid nominal species. Over time, Copemetopus was taxonomically assigned to Heterotrichea and Armophorea classes, but its phylogenetic affinities remained unknown. Until the present study, there were no molecular data available for Copemetopus representatives. Here, we present the 18S and 28S-rDNA sequences and the phylogenetic position of Copemetopus verae sp. nov., as well as its detailed morphological description based on live observations, protargol impregnation, and scanning electron microscopy. Transmission electron micrographs of the type species C. subsalsus Villeneuve-Brachon, 1940 reveal new morphological traits and a unique somatic ciliature pattern of Copemetopus, composed by short segments of dikinetids with one or two supplementary kinetosomes. The phylogenetic trees recovered Copemetopus as the sister group of the genus Protocruzia, both constituting early-divergent lineages that split first from a common ancestor of Intramacronucleta. Morphological and molecular evidence suggest that Copemetopus is neither a heterotrichean nor an armophorean ciliate, but a distinct clade related to Protocruzia. Published by Elsevier GmbH.
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