首页期刊导航|Soil Biology & Biochemistry
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Soil Biology & Biochemistry
Pergamon Press.
Soil Biology & Biochemistry

Pergamon Press.

0038-0717

Soil Biology & Biochemistry/Journal Soil Biology & BiochemistrySCIISTPAHCI
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    Interactions between microtopography, root exudate analogues and temperature determine CO2 and CH4 production rates in fire-degraded tropical peat

    Akhtar, HasanLupascu, MassimoSukri, Rahayu S.
    11页
    查看更多>>摘要:Repeated fires can alter the microtopography, vegetation composition, peat surface temperature and can increase the risk of flooding in tropical peatlands. However, difficult site conditions limit our understanding of these critical factors regulating greenhouse gas (GHG, viz. CO2 and CH4) production and emissions from fire-degraded tropical peatlands. We aimed to relate the complex interactions between peat oxic and anoxic conditions due to changes in microtopography, labile C inputs in the form of plant root exudates (from ferns and sedges), and diurnal temperature change in affecting CO2 and CH4 production from fire-degraded tropical peat. We found that the mesic condition, which reflects the field moisture or water-saturated oxic conditions in hummocks, acted as a strong source of CO2 (230 +/- 29 mu gCO2 g-1 hr-1) and weak sink for CH4 (-5.6 +/- 0.2 ngCH4 g-1 hr-1), while anoxic acted as a weak source of CO2 and strong source of CH4 (61.3 +/- 6.2 mu gCO2 g-1 hr-1; 592 +/- 111 ngCH4 g-1 hr- 1). Addition of labile C enhanced both the CO2 and CH4 production across treatments by five and two times for the two gases, respectively. Temperature sensitivity (Q10) for CO2 was higher for peat incubated under mesic conditions (1.21 +/- 0.28) whereas for CH4 it was higher in peat under anoxic conditions (1.56 +/- 0.35). Collectively, our result highlights how microscale changes in microtopography coupled with the quality and quantity of labile C and temperature variation can regulate GHGs production from fire-degraded tropical peatland areas, which are projected to increase with frequent fire episodes and future climate warming in the region. More importantly, changes in these critical factors may result in a net positive carbon emission with long-term elevated CH4 production and emissions rates from such fire-degraded tropical peatland areas.

    Susceptibility of new soil organic carbon to mineralization during dry-wet cycling in soils from contrasting ends of a precipitation gradient

    Wilhelm, Roland C.Lynch, LaurelWebster, Tara M.Schweizer, Steffen...
    11页
    查看更多>>摘要:The persistence of soil organic carbon (SOC) is influenced by soil physicochemical properties, organic matter quality, and climatic conditions that govern its vulnerability to microbial activity. We compared the susceptibility of newly formed SOC to mineralization in two soils (Andosols) that developed under contrasting precipitation regimes. Soil from the high rainfall region ('highrain') had higher SOC and lower iron concentrations than soils exposed to less rainfall ('lowrain'). We amended soils with 13C-labeled carbohydrates and measured the amount of substrate-derived SO13C mineralized when exposed to dry-wet cycling following months-long incubations. We hypothesized that susceptibility would differ due to iron content and mineralogy, initial SOC, substrate solubility (cellulose versus glucose amendment), and microbial substrate use efficiency (SUE). We found that SO13C was less susceptible to dry-wet cycling when more 13C was assimilated into microbial biomass and co-localized with mineral surfaces than when co-localized with existing organo-mineral surfaces, according to microscale NanoSIMS imaging. Considerably less SO13C was susceptible to mineralization in the ferrihydriterich (low SOC) lowrain soil than the leached (high SOC) highrain soil when C was added as either glucose (7.3-fold less C mineralized) or cellulose (15.2-fold less). The SUE of glucose was comparable to cellulose in lowrain soil where SO13C was less water soluble and coprecipitated with ferrihydrite, and used half as efficiently as cellulose in highrain soil. Our results show that the susceptibility of newly formed SOC to mineralization is modified by the effects of bioavailability on microbial metabolism and the availability of mineral surfaces for forming new organo-mineral complexes.

    Microbial metal homeostasis of biological soil crusts as a mechanism for promoting soil restoration during desert revegetation

    Liu, YubingWang, ZengruWu, ShujuanYuan, Xiaobo...
    9页
    查看更多>>摘要:The main characteristic of a desert ecosystem is a low content of water and nutrients, which reduces the rate of the biogeochemical cycle. In such a seemingly slow metabolism ecosystem, little attention has been paid to microbial metal homeostasis and its relationship with biogeochemical processes and soil properties. Here, we studied the microbial functional genes associated with metal homeostasis from five measurements (17y, 30y, 44y, 53y and 61y) during a 61-year development of biological soil crusts (BSCs) in the revegetation of the Tengger Desert. The aim was to determine the effect of metal homeostasis on biogeochemical cycle and soil properties in a desert ecosystem. Among the microbial functional genes detected by GeoChip 5.0 in BSC samples of different ages, the total signal intensity of iron (Fe) and nickel (Ni) metabolism genes was the highest in the ranking of the top 17 metals. Moreover, Proteobacteria and Actinobacteria were the major source groups at the phylum level of all metal metabolism genes. Almost all genes involved in metal homeostasis had the potential to function as transporters or redox catalyzers. Fe metabolism genes were the main nodes (ten of the top 50 genes) and the zinc (Zn) transporter gene znuC had the most connections (21) in the correlation network of metal genes. Metal metabolism was the focus (11 of the top 30 nodes) for the biogeochemical cycle and other metabolic processes. It had the closest relationship with stress responses, the carbon (C) cycle, and virulence, in that order, and a relatively weak relationship with the nitrogen (N) cycle. Metal homeostasis showed a close positive relationship with soil physiochemical (48.7% explanation) and biological properties (51.4% explanation) compared with C and N cycling (35.2% and 19.8% explanation, respectively). Due to the promotion of soil nutrient and microbial activity in BSCs, metal homeostasis may be regarded as a potential mechanism for soil restoration during desert revegetation. This study unravels the importance of metal homeostasis in the regulation of soil quality and underscores the need for future studies that take a holistic view on biogeochemical cycles mediated by metal homeostasis in soil ecosystems.

    Stoichiometric regulation of priming effects and soil carbon balance by microbial life strategies

    Zhu, ZhenkeFang, YunyingLiang, YuqingLi, Yuhong...
    11页
    查看更多>>摘要:Carbon and nutrient inputs are required to stimulate the formation and mineralization of soil organic carbon (SOC) through processes related to microbial growth and priming effects (PEs). PEs are thought to affect microbial life strategies, however, the mechanisms underlying their role in SOC formation and microbial dynamics remain largely unknown, particularly in paddy soils. Here, we examined the underlying strategies and response mechanisms of microorganisms in regulating PEs and C accumulation in flooded paddy soil. Levels and stoichiometric ratios of resources were evaluated over a 60-day incubation period. Low (equivalent to 50% soil microbial biomass C [MBC]) and high (500% MBC) doses of C-13-labeled glucose were added to the soil, along with mineral N, P, and S (NPS) fertilizers at five concentrations. Glucose mineralization increased linearly with NPS concentration under both low and high glucose inputs. However, glucose addition without nutrients induced the preferential microbial utilization of the readily available C, leading to negative PEs. Under high-glucose input, the intensity of negative PEs increased with increasing NPS addition (PE: from-460 to-710 mg C kg(-1) soil). In contrast, under low-glucose inputs, the intensity of positive PEs increased with increasing NPS addition (PE: 60-100 mg C kg(-1) soil). High-glucose input with NPS fertilization favored high-yield microbial strategists (Y-strategists), increasing glucose-derived SOC accumulation. This phenomenon was evidenced by the large quantities of 13C detected in microbial biomass and phospholipid fatty acids (PLFAs), increasing the soil net C balance (from 0.76 to 1.2 g C kg(-1)). In contrast, low levels of glucose and NPS fertilization shifted the microbial community composition toward dominance of resource-acquisition strategists (A-strategists), increasing SOC mineralization. This was evidenced by( 13)C incorporation into the PLFAs of gram-positive bacteria, increased activity of N-and P-hydrolases, and positive PEs for acquiring C and nutrients from soil organic matter. Consequently, the soil net C balance decreased from 0.31 to 0.01 g C kg 1 soil. In conclusion, high C input (i.e., 500% MBC), particularly alongside hig NPS addition, increases SOC content via negative priming and microbial derived C accumulation due to the shift toward Y-strategist communities which efficiently utilize resources. This study highlights the importance of mineral fertilization management when incorporating organic supplements in paddy soils to stimulate microbial turnover and C sequestration.

    Functional N-cycle genes in soil and N2O emissions in tropical grass-maize intercropping systems

    Mariano, EduardoDiniz, Priscila P.Borges, Beatriz M. F.Borges, Clovis D....
    12页
    查看更多>>摘要:There is evidence that forage grasses such as Megathyrsus and Urochloa can suppress nitrification, with direct or indirect consequences on soil inorganic N dynamics and nitrous oxide (N2O) emissions. However, the influence of soil chemical properties on the dynamics of functional N-genes and losses of N in maize (Zea mays L.) inter cropped with forage grasses under N fertilization is poorly understood. In this study, soil samples and N2O emissions were analyzed from a field experiment in which maize (fertilized or not with ammonium-based fertilizer) was intercropped with Guinea grass (M. maximus cv. Tanzania), palisade grass (U. brizantha cv. Marandu), and ruzigrass (U. ruziziensis cv. Comum). Soil N-cycle microorganisms [16S rRNA of bacteria and archaea, nifH (gene encoding N2-fixing bacteria), ammonia-oxidizing bacteria (AOB) and archaea (AOA), nirS (encoding nitrite reductase), and nosZ (encoding nitrous oxide reductase)] were influenced by forage grass, N fertilization, and sampling time, but no evidence of biological nitrification inhibition was found. Palisade grass was associated with a higher abundance of nifH (7.0 x 105 gene copies g-1 soil, on average) in the absence of N compared with the other grasses (4.3 x 105 gene copies g-1 soil, on average). Nitrogen fertilization increased the abundance of AOB but not AOA. Furthermore, N2O flux was influenced by AOB, water-filled pore space, and N fertilization, whereas the cumulative N2O emission and fertilizer-induced emission factor (0.36%, on average) were not affected by the grasses. In conclusion, this study reveals the strong dominance of AOB under ammonium supply, potentially stimulating N2O emissions in maize-forage grass intercropping systems.

    Chronic nitrogen deposition drives microbial community change and disrupts bacterial-fungal interactions along a subtropical urbanization gradient

    Yu, WenjuanHall, Steven J.Hu, HaoyanDutta, Somak...
    12页
    查看更多>>摘要:Microbial responses to nitrogen (N) enrichment under chronic ambient N deposition conditions are understudied, especially in subtropical forests which are often not limited by N. We investigated variation in subtropical forest soil microbial biomass and composition, bacterial-fungal interactions (BFI), and their linkages to N cycling along a gradient of high-rate N deposition in Shanghai, China (estimated N deposition > 40-100 kg N ha(-1) yr(-1)). In contrast to global and temperate findings, arbuscular mycorrhizal (AM) fungal biomass and the ratio of AM to saprotrophic fungi increased with ammonium, indicating possibly increased P limitation following N enrichment in this subtropical ecosystem. Positive BFI (positive relationships between a particular fungal OTU and bacterial OTU) mostly decreased (by > 85%) with increasing N availability, as did negative BFI (by > 85%), suggesting that bacterial-fungal cooperation and competition both tended to weaken under nutrient-rich conditions. Ammonium and nitrate were significantly related to overall microbial community composition and microor-ganisms at different taxonomic levels. Increasing ammonium seemed to favor taxa from bacterial phyla Acid-obacteria, Actinobacteria, and Nitrospirae. Most pathogenic fungal OTUs increased with nitrate. Other microbial groups and taxa involved in litter decomposition and N cycling also had significant relationships with ammonium and/or nitrate. We found that N availability may drive significant microbial community change even when present in excess. Overall, we observed strong microbial linkages to N availability in subtropical forests under chronic high-rate N deposition, and specific relationships were often contrary to previous observations from temperate N addition experiments.

    Urea uptake by spruce tree roots in permafrost-affected soils

    Fujii, KazumichiHayakawa, Chie
    7页
    查看更多>>摘要:Biomass productivity of black spruce trees is strongly limited by soil nitrogen (N) in shallow active layer on permafrost. Trees and mycorrhizal roots are known to absorb amino acids to bypass slow N mineralization in Nlimited boreal forest soils. However, amino acid uptake strategy of tree roots cannot fully explain their advantages in competition for soil N with other plants and microbes. We investigated the potentials of tree roots to absorb urea as well as amino acids and inorganic N, using tracer experiments of 13C, 15N-labelled glutamic acid and urea and 15N-labelled ammonium nitrate in black spruce forests growing on permafrost-affected soils with different permafrost table depths in the eastern edge of the Mackenzie river delta (northwest Canada). We demonstrated that black spruce roots have potentials to absorb intact urea but only in soils with shallow permafrost, where urea accumulates due to limited microbial mineralization activity. This contrasts with soils with deep permafrost table, where roots absorb amino acids and inorganic N. Allocation of fine roots to colder subsoil above permafrost provides advantages for trees monopolizing urea-N. Despite lower energy efficiency of urea utilization compared to inorganic N and amino acids, urea uptake is one of N acquisition strategies for spruce growing on N-limited subarctic soil.

    Growth of soil microbes is not limited by the availability of nitrogen and phosphorus in a Mediterranean oak-savanna

    Morris, Kendalynn A.Richter, AndreasMigliavacca, MircoSchrumpf, Marion...
    11页
    查看更多>>摘要:The environmental conditions under which the availability of inorganic nutrients such as nitrogen (N) and phosphorus (P) influence soil microbial growth are poorly understood, especially with regards to how fertilization changes specific aspects of microbial growth such as carbon-use efficiency (CUE). Microbial CUE is the fraction of C converted into biomass out of all C taken in and plays a critical role in global C budgets. Using the 18O labeled water method we tested short vs. long-term effects of N and/or P fertilization on microbial growth, CUE, and C, N, and P-acquiring enzyme activities in two soils from an oak-savanna, which differ in their soil organic matter (SOM) content. We hypothesized that soils with more SOM (from under tree canopies) would have higher microbial growth rates than soils with less SOM (from open grassland), and that microbial growth and CUE would increase with fertilization. We further hypothesized that these increases would be associated with a decrease in enzyme activity and a shift towards older SOM substrates in the short-term, in contrast to substrates from recently fixed C resulting from increased plant productivity in the long-term. We found that nutrient additions did not affect microbial growth or CUE in the relatively high SOM habitat on either time scale. In contrast, the low SOM habitat had lower growth and CUE when single nutrients were added, with significantly reduced growth when P alone was added, but was unchanged when N and P were added together. Our results show that short-term, stoichiometric imbalances can reduce microbial growth and that microbial growth at this site is limited not by nutrients but by the amount of C available to soil microbes.