首页期刊导航|Taxon
期刊信息/Journal information
Taxon
International Bureau for Plant Taxonomy and Nomenclature
Taxon

International Bureau for Plant Taxonomy and Nomenclature

0040-0262

Taxon/Journal TaxonSCIAHCIISTP
正式出版
收录年代

    If “Rhodes‐” must fall, who shall fall next?

    Sergei?L. Mosyakin
    7页
    查看更多>>摘要:Abstract Smith and Figueiredo, in their recent articles, raised important issues of getting rid of colonial legacy in botanical nomenclature. Some other politically motivated claims and proposals to amend the International Code of Nomenclature for algae, fungi, and plants (ICN) have also been published or discussed by some other authors. In particular, Smith and Figueiredo expressed their opinion that “a proposal to amend to the Code, replacing epithets with the root ‘rhodes‐’, where Cecil John Rhodes, or any landmark named for him is commemorated, should be considered”. However, Rhodes is not the only controversial person whose name is currently associated with names of taxa. Here I consider several other cases of people of the past who were or are also sometimes treated, at least by some, as racists, colonialists, imperialists, war criminals, etc. Also, I discuss, in the context of Art. 51 of the ICN, a more general issue of names and epithets that are or may be considered offensive, inappropriate, or unacceptable by some people or groups of people. The nomenclature of organisms governed by nomenclatural codes is the crucially important tool in taxonomy and all sciences and fields of activity relying on or referring to it. Nomenclature also reflects the rich and fascinating history of scientific exploration of the living world. That history contains some unpleasant or even tragic events, episodes and periods, and not all people commemorated in names of organisms were free of sins by our modern standards. Science cannot and should not, however, employ politically motivated censorship and totalitarian cleansing of scientific history, and of the biological nomenclature that reflects that history. Nomenclature of plants, algae, and fungi shall not be transformed into a battleground for politically motivated campaigns. Only some exceptions are possible, but they should be dealt with the proper respect to the Code and to the centuries of taxonomic and nomenclatural traditions.

    Global phylogeny and taxonomic reassessment of the lichen genus Dendriscosticta (Ascomycota: Peltigerales)

    Antoine SimonBernard GoffinetLi‐Song WangToby Spribille...
    32页
    查看更多>>摘要:Abstract The genus Dendriscosticta (Ascomycota: Peltigerales) encompasses several distinctive lichen‐forming fungal species restricted to the Northern Hemisphere. Most are flagship species of old‐growth forests with good air quality. A global phylogeny of the genus based on multilocus sequence data (ITS, RPB1, EF‐1α, MCM7), model‐based phylogenetic methods, and morphological and chemical assessments, reveals a high level of cryptic speciation often associated with restricted geographical distribution and/or chemical characters. Using sequence‐based species delimitation approaches, we circumscribe two main clades referred to as the D.?wrightii clade, with five unequivocal species, including D.?gelida sp. nov., and the D.?praetextata clade, with eight putative species, including D.?phyllidiata sp. nov. The absence of recently collected material of D.?hookeri comb. nov. from the type locality unfortunately prevents assignment of this epithet to one of the five supported lineages sharing this morphotype. Three new combinations are proposed: D.?hookeri, D.?insinuans comb. nov. and D.?yatabeana comb. nov. Epitypes are designated for D.?wrightii and D.?yatabeana. Species diversity within the genus increased from four to nine. Our morphological assessment confirmed that Sticta and Dendriscosticta can be readily distinguished by the presence of excipular algae whereas the structure of the lower surface pores is not a reliable diagnostic feature.

    A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence

    Ran WeiXian‐Chun Zhang
    19页
    查看更多>>摘要:Abstract The polygrammoid fern family Polypodiaceae represents one of the most diversified epiphytic fern groups, with more than 1600 species distributed on all continents except Antarctica, with the highest species diversity in tropical and subtropical regions. Despite progress in recent phylogenetic studies of Polypodiaceae, the infrafamilial classification of this group of ferns is still problematic. Here, we explore the phylogenetic relationship within Polypodiaceae using plastid genome (plastome) and nuclear ribosomal cistron genome data obtained from high‐throughput sequencing. Although genome skimming data strongly support the monophyly of many genera and clades of Polypodiaceae, relationships within some clades and along the backbone of the phylogeny remain incongruent between plastome and nuclear data. The explanation is possibly a factor of complex evolutionary history found in these clades, such as rapid radiation, incomplete lineage sorting, ancient hybridization, and recent introgression. Based on the concatenated dataset, our phylogenetic analyses support nine major clades in Polypodiaceae, which merit the recognition as subfamilies, Crypsinoideae, Grammitidoideae, Loxogrammoideae, Microsoroideae, Platycerioideae, Polypodioideae, Adetogrammoideae, Campyloneuroideae, and Serpocauloideae, while the latter three are separated from Polypodioideae as new subfamilies. All of these infrafamilial divisions, identified with molecular data, are further supported by non‐molecular features including leaf dissection, venation, scales and paraphyses, soral features, and geographical distributions. Systematic and taxonomic discussions on the subfamilial treatment are also provided.

    A classification of the aquatic Podostemaceae subfamily Tristichoideae, with a new genus based on ITS and matK phylogeny and morphological characters

    Satoshi KoiPrem Lal UniyalMasahiro Kato
    14页
    查看更多>>摘要:Abstract The submerged lithophilous Podostemaceae show remarkable variation in phenotypic characters. Taxonomic estimation of the characters alone may not have produced a natural classification of subfamily Tristichoideae. Among the genera, Cussetia and Indotristicha have not been examined by detailed morphological observations and molecular analyses. The present ITS and/or matK phylogenies indicated that Cussetia carinata is close to Terniopsis with high support, and Indotristicha tirunelveliana and Dalzellia form a clade with robust support, while the congeneric I.?ramosissima was separated from the clade. Cussetia differs from Terniopsis by having many, alternately 3‐whorled, carinate bracts and heteromorphic shoots, whereas they share the capped root and 3‐stichous leaves. The habitat of C.?carinata is the deepest under water in the family. Indotristicha tirunelveliana differs from Dalzellia in the holdfasts, shoots, ramuli, phyllotaxis and cupules. Based on the consistent phylogeny and morphological variation, the genus Cussetia is accepted and a new genus for I.?tirunelveliana is proposed. The emended seven genera were characterized primarily by vegetative characters. Tabulated diagnostic characters, a synopsis and a key to genera is presented.

    Character evolution and biogeography of Casearia (Salicaceae): Evidence for the South American origin of a pantropical genus and for multiple migrations to the Caribbean islands

    Thomas BorschAstrid MestierGrischa BrokampMarcela Celis...
    27页
    查看更多>>摘要:Abstract Casearia (Salicaceae) is a pantropical genus of circa 200 species, around half of which dwell in the Neotropics. Despite the availability of phylogenetic studies that suggest that Casearia sensu Sleumer is not monophyletic, a strong phylogenetic framework was still lacking for this genus. We tested the monophyly of Casearia and examined the relationships of its species to other taxa of the tribe Samydeae, including Laetia, Samyda and Zuelania, which recently have been sunk into Casearia, as well as Euceraea, Lunania, Neoptychocarpus, Ryania and Tetrathylacium. We further put a focus on the Neotropical taxa since Casearia and allies are speciose both on the Caribbean islands and adjacent mainlands, thus providing an interesting group to address the origin of the Caribbean and Cuban flora. Our phylogenetic analyses based on four combined rapidly evolving plastid regions (petD, rpl16, rps4‐trnT‐L‐F, trnK‐matK‐psbA) as well as nuclear ITS revealed Casearia as monophyletic with high support, including not only the former members of Laetia, Samyda and Zuelania but also Euceraea and Neoptychocarpus. Casearia is constituted by several major clades, mostly being entirely Neotropical, one of which exclusively comprises species endemic to the Caribbean islands. Another clade, which includes all Palaeotropical species, is nested among Neotropical lineages. Our divergence date estimates using the plastid dataset and fossil calibration points in Salicaceae indicate that the Casearia crown group started to diversify during the late Eocene, approximately 39?Ma. The stem of the Old World clade diverged from Neotropical ancestors around 27 Ma, in the Oligocene. We used BayesTraits to reconstruct the evolution of seven characters commonly used to define Casearia and allied genera. We found morphological characters, such as branched inflorescences (fasciculate, glomerulous, cymose) or uniseriate stamen series, that work well to circumscribe the genus, whereas dioecy, which was used to diagnose Neoptychocarpus, or higher stamen numbers (>12), found in Laetia and Zuelania, are homoplastic in Salicaceae, the latter character derived within Casearia from ancestors with 7–12 stamens. Pellucid dots appear to have evolved earlier than the divergence of the Casearia clade in Samydeae, and were lost in Ryania and Tetrathylacium, and thus are no synapomorphy for Casearia. In order to establish a monophyletic genus concept for Casearia, we propose to also merge Euceraea and Neoptychocarpus. Our reconstruction of ancestral areas using BioGeoBears indicate that South America is the ancestral area of Casearia. From there, multiple migrations occurred to Mesoamerica and the Caribbean islands. The Caribbean that comprises nearly all Caribbean endemics started to diversify around 9.5?Ma. Our trees depict C.?corymbosa, which exhibits significant infraspecific phylogenetic structure for the sampled Mexican and Colombian individuals, as the sister to the Caribbean clade. The other clade, with Cuban endemics (C.?ternstroemioides) but also Mesoamerican and South American taxa, is not sufficiently resolved internally, to allow biogeographic conclusions. The Old World clade of Casearia provides another example for a late Laurasian migration starting in the Neotropics.

    Phylogenomic analysis confirms polyphyly of Leptospermum and delineates five major clades that warrant generic recognition

    Rachel M. BinksMargaret HeslewoodMargaret ByrnePeter G. Wilson...
    12页
    查看更多>>摘要:Abstract Leptospermum is an ecologically and economically important genus with a long unresolved taxonomic issue concerning polyphyly, as indicated from early molecular analysis on two chloroplast regions. To resolve this, we used genome skimming to obtain high‐copy chloroplast and nuclear ribosomal DNA for a comprehensive phylogenomic analysis of 110 accessions comprising of 38 Leptospermum taxa, 6 closely allied genera and 5 outgroup genera. Maximum likelihood and Bayesian analyses resolved congruent clades for the chloroplast (132,143?bp: 80 CDSs, 4 rRNA genes, 29 tRNA genes, 17 introns and 97 IGSs) and nuclear (1219?bp: ITS1, ITS2, ETS, 5.8S) alignments to provide a robust interpretation of evolutionary relationships. Together, these data confirmed extensive polyphyly of Leptospermum that separated the genus into five monophyletic clades spread amongst clades representing six closely allied genera: Agonis, Asteromyrtus, Homalospermum, Kunzea, Neofabricia and Pericalymma. These five Leptospermum clades share some similarities with morphological and genetic groupings identified previously but provide greater resolution to inform a clear pathway to taxonomic revision. The evidence presented here provides support for resolution of the current polyphyly of Leptospermum through the recognition of five genera, while retaining all other genera of Leptospermeae in their current circumscription.

    A 638‐gene phylogeny supports the recognition of twice as many species in the Malagasy endemic genus Capurodendron (Sapotaceae)

    Carlos G. BoludaCamille ChristeYamama NaciriLaurent Gautier...
    36页
    查看更多>>摘要:Abstract The Malagasy genus Capurodendron currently accommodates 26 described species and is the largest genus of the family Sapotaceae in Madagascar. These species are frequently logged because of their valued hardwood, which potentially puts them at risk of extinction. Species‐level identifications are often problematic, and this hinders both an accurate assessment of their conservation status and the development of effective protection measures. We sorted all the material (ca. 860 collections) available in the herbaria with significant collections for Madagascar into 47 putative species based on morphology. On 41 of these, for which we were able to retrieve suitable DNA, we conducted a phylogenetic reconstruction based on molecular sequences of 638 loci from 108 Capurodendron specimens, performing a target capture approach combined with next‐generation sequencing. Maximum likelihood (RAxML), pseudocoalescence (ASTRAL), and coalescence (STACEY) analyses showed that Capurodendron comprises two deeply divergent lineages. One, which includes a single species, is here newly described as C. subg. Reflexisepala based on its distinctive morphology. The second lineage contains all remaining species, which seem to have resulted from a rapid radiation event. The phylogenetic tree provides good support for most of the species hypothesized based on morphology, with the exception of two species‐groups that we have named the Arid Complex and the Eastern Complex. As many as 20 species‐level lineages genetically distinct from any of the currently recognized species were identified, 17 of which were morphologically well‐characterized, representing strong candidates for new species. This would suggest that Capurodendron is the most species‐rich endemic genus of plants in Madagascar. While 14 of these 20 clades are still under study, we here describe six species new to science: Capurodendron andrafiamenae (provisionally assessed as CR), C. aubrevillei (VU), C. birkinshawii (CR), C. naciriae (EN), C. randrianaivoi (CR), and C. sakarivorum (EN). Capurodendron oblongifolium comb. nov. (EN), previously regarded as a variety of C. perrieri, represents a distinct lineage that is here recognized at the species level. The newly described species are illustrated by line drawings and photographs from the field, and a preliminary threat assessment is provided. We discuss the evolutionary history of Capurodendron and also explore the question of node age estimates and their methodological limitations.

    One more piece to the puzzle: Diadorimia, a new monotypic genus in the Spermacoceae (Rubiaceae), endemic to the campo rupestre of Minas Gerais, southeastern Brazil

    Jo?o A.M. CarmoMarcelo ReginatoJavier E. FlorentínMariela Nu?ez Florentin...
    24页
    查看更多>>摘要:Abstract Spermacoceae is the largest predominantly herbaceous lineage in the Rubiaceae, and regarded as one of its most taxonomically complex and controversial tribe, especially regarding generic delimitation. Molecular phylogenies have established the concept of a broadly circumscribed Spermacoceae, which includes the genera traditionally associated with the tribe, i.e., the Spermacoce clade, and the former Hedyotideae and Manettieae. A major challenge in the Spermacoce clade is related to the delimitation of Borreria and Spermacoce, which appeared intermingled with several smaller and morphologically well‐defined genera in more recent phylogenies, such as the Brazilian endemic Psyllocarpus. One of its species, P.?densifolius, diverges morphologically from the others, as preliminary phylogenetic analyses have shown that it is not closely related to Psyllocarpus nor any other genus in the Spermacoce clade. We conducted a broad phylogenetic analysis, including ca. 63% of the genera in the Spermacoceae, using a variety of approaches to address incongruence among markers and lack of resolution and/or low support for branches, to accurately assess its position. We used nuclear ribosomal (ITS) and plastid (rps16 intron, trnL‐F intergenic spacer) DNA regions for Bayesian inference and maximum likelihood analyses, as well as species tree inference. We identified incongruence not only between nuclear and plastid DNA but also between the plastid regions. We also showed that the topologies derived from the multispecies coalescent diverged from that of the concatenated analysis, even though the position of P.?densifolius, as sister to the clade formed by the remaining Spermacoceae, remained stable across different datasets and inference methods. We here propose the recognition of the new genus Diadorimia to accommodate P.?densifolius, which can be characterized by its cespitose habit arising from a well‐developed, woody subterranean system, triangular stipules with margins bearing four small lobes, heterostylous flowers subtended by a pair of hyaline bracteoles, double reticulate pollen grains, and capsules with longitudinal‐oblique dehiscence, with the two valves forming one single caducous diaspore keeping their respective seed trapped inside. We provide a taxonomic treatment with a key to the heterostylous genera of the Spermacoceae occurring in the Americas, a description of the new genus, and the new combination of its type, as well as comments on its distribution and conservation.

    Disentangling the historical collection of José Jerónimo Triana from the República de la Nueva Granada between 1851 and 1857

    Sandra ReinalesCarlos Parra‐O.
    20页
    查看更多>>摘要:Abstract The specimens collected by José Jerónimo Triana are an important legacy of the first major scientific expedition organized by the government of Nueva Granada, present‐day Colombia: the Chorographic Commission. After finishing his duties in the Commission, Triana gave to the Colombian government a complete set of his specimens in 1856, along with a catalog where he taxonomically organized and numbered his collections. After traveling to Europe in May 1857, carrying part of his herbarium, Triana prepared a new catalog in which he reorganized the numbering of his collections, and added at least three additional number series: the serial numbers (i.e., Triana “collection numbers”), the “Linden” numbers, and the number of duplicates for each gathering. The use of different number series in the two catalogs and on the labels of duplicates of the same gathering stored in numerous herbaria around the world has produced ambiguity in the designation of type specimens collected by Triana. These nomenclatural issues were analyzed, and a guideline is presented for lectotypifying plant names for which Triana's specimens were used as types. Sixty‐five Triana specimens already deposited in COL were newly identified as types of 62 species names from 36 families, after establishing their proper correspondence to duplicates currently stored in different European herbaria.

    Lectotypification of Uraria prunellifolia and U. paniculata (Leguminosae): Names associated with medicinally important rare plants

    Jahnabi GogoiTikam Singh Rana
    4页
    查看更多>>摘要:Abstract Uraria prunellifolia and U.?paniculata are medicinally important, and rare in occurrence. The former is believed to be extinct in some parts of India, and the latter was recently rediscovered. The nomenclatural history of U.?prunellifolia and U.?paniculata is discussed here, and both the names are typified.