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中华医学遗传学杂志
四川大学
中华医学遗传学杂志

四川大学

张思仲

双月刊

1003-9406

cjmg@cma.org.cn

028-85501165

610041

四川省成都市人民南路三段17号(四川大学华西校区)

中华医学遗传学杂志/Journal Chinese Journal of Medical GeneticsCSCD北大核心CSTPCD
查看更多>>中华医学会主办,四川大学承办。本刊以报道我国医学遗传学、人类遗传学和相关领域的基础理论、技术方法等最新研究成果;以从事医学遗传学工作的各科临床医生、计划生育工作者、大专院校和科研单位有关人员为主要读者对象。设有述评、论著、技术与方法、综述、调查报告、遗传咨询、临床细胞遗传学、病例报告等栏目。 从1998年以来被美国《医学索引》(IM)、《化学文摘》(CA)、《工程索引》(EI)、ISI数据库的Biological Abstracts及BIOSIS Previews,波兰《哥白尼索引》(IC),荷兰《医学文摘》(EM)和俄罗斯《文摘杂志》(AJ)等国际著名检索系统收录。
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    F11基因复合杂合变异导致遗传性凝血因子Ⅺ缺陷症一个家系的分析

    王欢欢蒋淑婷夏慧南杨丽红...
    1319-1323页
    查看更多>>摘要:目的 探讨1个F11基因新变异导致复合杂合性遗传性凝血因子Ⅺ(FⅪ)缺陷症家系的分子致病机制。 方法 选取2020年11月30日因"尿路结石"就诊于温州医科大学附属第一医院的1例遗传性凝血因子Ⅺ缺陷症男性先证者及其家系成员(3代7人)作为研究对象,收集先证者的临床资料,检测先证者及其家系成员的相关凝血指标。提取外周血基因组DNA进行PCR扩增,用DNA直接测序法分析先证者F11基因的全部外显子、侧翼序列、5′和3′端非翻译区序列及家系成员相应的变异位点区域。用生物信息学软件分析氨基酸变异位点的保守性,分析变异对蛋白质功能的影响。根据美国医学遗传学与基因组学学会(ACMG)相关变异评级指南对变异位点进行评级。 结果 先证者为36岁男性,其活化部分凝血活酶时间(APTT)为89.2 s,明显延长,FⅪ活性(FⅪ:C)和FⅪ抗原(FⅪ:Ag)分别为2.0%和3.5%,均极度降低。基因测序发现先证者和其姐姐的F11基因第7外显子存在父源c.689G>T(p.Cys230Phe)杂合错义变异,第13外显子存在母源c.1556G>A(p.Trp519*)杂合无义变异。保守性分析结果表明Cys230呈高度保守。c.1556G>A(p.Trp519*)为已报道的致病性变异。依据ACMG变异评级指南,c.689G>T评级为可能致病变异(PM2_Supporting+PM5+PP1+PP3+PP4)。 结论 F11基因第7外显子c.689G>T杂合错义变异及第13外显子c.1556G>A杂合无义变异考虑是该FⅪ缺陷症家系的致病原因。 Objective To explore the molecular pathogenesis of a Chinese pedigree affected with Hereditary coagulation factor Ⅺ (FⅪ) deficiency due to variants of the F11 gene. Methods A male proband with Hereditary coagulation factor Ⅺ deficiency who was admitted to the First Affiliated Hospital of Wenzhou Medical University due to urinary calculi on November 30, 2020 and his family members (7 individuals from 3 generations in total) were selected as the study subjects. Clinical data of the proband were collected, and relevant coagulation indices of the proband and his family members were determined. Genomic DNA of peripheral blood samples was extracted for PCR amplification. All exons, flanking sequences, and 5′ and 3′ untranslated regions of the F11 gene of the proband were analyzed by direct sequencing. And the corresponding sites were subjected to sequencing in other family members. The conservation of amino acid variation sites was analyzed by bioinformatic software, and the effect of the variant on the protein function was analyzed. Variants were graded based on the guidelines from the American College of Medical Genetics and Genomics (ACMG). Results The proband was a 36-year-old male. His activated partial thromboplastin time (APTT) was 89.2s, which was significantly prolonged. The FⅪ activity (FⅪ: C) and FⅪ antigen (FⅪ: Ag) were 2.0% and 3.5%, respectively, which were extremely reduced. Both the proband and his sister were found to harbor compound heterozygous variants of the F11 gene, including a c. 689G>T (p.Cys230Phe) missense variant in exon 7 from their father and a c. 1556G>A (p.Trp519*) nonsense variant in exon 13 from their mother. Conservation analysis indicated the Cys230 site to be highly conserved. The c. 1556G>A (p.Trp519*) variant was known to be pathogenic, whilst the c. 689G>T variant was classified as likely pathogenic (PM2+ PM5+ PP1+ PP3+ PP4) based on the ACMG guidelines. Conclusion The c. 689G>T and c. 1556G>A compound heterozygous variants of theF11 gene probably underlay the pathogenesis of FⅪ deficiency in this pedigree.

    凝血因子Ⅺ缺陷症F11基因生物信息学家系

    FGG基因变异致遗传性异常纤维蛋白原血症一个家系的遗传学分析

    邵秀茹马军王志国孙明艳...
    1324-1329页
    查看更多>>摘要:目的 探讨1个无症状遗传性异常纤维蛋白原血症(CD)家系的凝血异常和分子遗传学特征。 方法 选取2021年8月3日因"患卵巢畸胎瘤准备行腹腔镜手术,术前凝血功能异常"就诊于哈尔滨市第一医院血液肿瘤研究所的女性先证者及其家系成员(共3代8人)作为研究对象,收集先证者及其家系成员的临床资料。用Clauss法和衍算法(DFg-PT)检测先证者及其父母、儿子的血浆纤维蛋白原的活性(Fg:C),用免疫比浊法测定抗原(Fg:Ag)水平。用PCR扩增仪进行纤维蛋白原(Fg)相关基因检测变异位点。 结果 先证者为32岁女性。先证者及其父亲Fg:C分别为0.71 g/L和0.87 g/L,明显低于正常范围,先证者母亲及儿子Fg:C均在正常范围。先证者及其父亲Fg:C/Fg:Ag比值为<0.7,明显下降,而母亲及儿子>0.7。先证者及其父亲的凝血酶时间延长,而母亲及儿子正常。先证者及其父母和儿子的凝血酶原时间、活化部分凝血活酶时间未见明显异常。基因检测结果提示先证者及其父亲FGA基因存在已报道为良性的c.991A>G(p.Thr331Ala)错义变异以及FGG基因的c.1211C>T(p.Ser404Phe)错义变异。根据美国医学遗传学与基因组学学会变异评级相关指南,c.1211C>T错义变异评级为可能致病的变异(PM2_Supporting+PM5+PP3+PP4)。蛋白模拟预测模型提示c.1211C>T导致Fg γ链第404位氨基酸残基从丝氨酸变异为苯丙氨酸,可能造成局部的氨基酸之间的作用力发生变化,从而影响纤维蛋白原γ链之间聚合或者与另一纤维蛋白原α链的结合。 结论 FGG基因的c.1211C>T(p.Ser404Phe)错义变异可能是先证者的致病原因。上述发现为该家系的诊断及遗传咨询提供了帮助。 Objective To explore the coagulation deficit and genetic basis for a Chinese pedigree affected with Congenital dysfibrinogenemia (CD). Methods Peripheral venous blood samples of the proband and her family members (including 4 individuals from three generations) were subjected to routine blood test and assays of liver and kidney functions and viral hepatitis to exclude related diseases. Clauss method and DFg-PT method were used to determine the fibrinogen activity (Fg: C), and an immunoturbidimetric assay was used to determine the level of fibrinogen antigen (Fg: Ag). All of the exons (22 in total) and their flanking sequences of the FGA, FGB and FGG genes were amplified by PCR and directly sequenced. Variants in the coding regions of the three genes and transcriptional splicing sites were screened by using Mutation Surveyor™ software. Results The Clauss method showed that Fg: C was significantly reduced in the proband and her father, whilst her mother and son were normal. With the DFg-PT method, the proband, her parents and son were all within the normal range. The Fg: C/Fg: Ag ratio of the proband and her father was lower than 0.7, whilst her mother and son were above 0.7. No significant change in the prothrombin time, activated partial thromboplastin clotting time and thrombin time was noted. Two genetic variants were detected, which included a homozygous missense variant in the FGA gene [c.991A>G (p.Thr331Ala)], which was predicted to be benign, and a heterozygous missense variant of the γ chain of theFGG gene [c.1211C>G (p.Ser404Phe)], which is located in a conserved region and unreported in the CLINVAR/HGMD/EXAC/1000G databases and literature. Conclusion This pedigree has conformed to the autosomal dominant inheritance of CD. The c. 1211C>T (p.Ser404Phe) missense variant of the γ chain of theFGG gene probably underlay the pathogenesis of CD in this pedigree. The variant was unreported previously and named as "Fibrinogen Harbin II Ser404Phe" .

    遗传性异常纤维蛋白原血症常染色体显性遗传基因家系

    罕见 PROC基因复合杂合变异所致蛋白C缺乏症胎儿1例的临床及遗传学分析

    闫露露霍奕帆刘颖文张玉鑫...
    1330-1333页
    查看更多>>摘要:目的 探讨1例脑积水和脑室出血胎儿的遗传学病因,为其产前诊断提供依据。 方法 应用全外显子组测序(WES)技术筛选与胎儿表型相符的基因变异,对候选变异进行Sanger测序验证。 结果 胎儿存在PROC基因c.818G>A(p.W273X)和c.833T>C(p.L278P)复合杂合变异,分别遗传自其母亲和父亲。按照美国医学遗传学与基因组学学会(ACMG)相关指南,二者均被判定为可能致病变异(PVS1_Strong+PM2_Supporting+PP4;(PM2_Supporting+PM3+PP1+PP3+PP4)。 结论 本研究胎儿被诊断为由PROC基因c.818G>A(p.W273X)和c.833T>C(p.L278P)复合杂合变异所致的蛋白C缺乏症。上述发现丰富了PROC基因的变异谱,为其家系的遗传咨询和产前诊断提供了依据。 Objective To explore the genetic etiology for a fetus with hydrocephalus and intraventricular hemorrhage. Methods Trio whole exome sequencing was carried out. Candidate variants were verified by Sanger sequencing of the fetus and its parents. Results The fetus was found to harbor c. 818G>A (p.W273X) and c. 833T>C (p.L278P) compound heterozygous variants of thePROC gene, which were respectively inherited from its mother and father. Based on the guidelines of the American College of Medical Genetics and Genomics (ACMG), both variants were predicted to be likely pathogenic (PVS1_Strong+ PM2_Supporting+ PP4 PM2_Supporting+ PM3+ PP1+ PP3+ PP4). Conclusion The fetus was diagnosed with Protein C deficiency due to the c. 818G>A (p.W273X) and c. 833T>C (p.L278P) compound heterozygous variants of thePROC gene. Above finding has enriched the spectrum of PROC gene variants and enabled genetic counseling and prenatal diagnosis for the family.

    蛋白C缺乏症全外显子组测序PROC基因复合杂合变异

    PDGFRβ基因检测在血液肿瘤中的临床应用

    郭孟乔郭方宇张燕程辉...
    1334-1339页
    查看更多>>摘要:目的 探讨伴有血小板衍生生长因子β(PDGFRβ)基因不同类型异常的血液系统肿瘤的临床及实验室特征。 方法 回顾性分析海军军医大学附属长海医院2009年至2020年间带有5号染色体长臂(5q)异常且病史资料较为全面的141例病例,收集其临床资料。运用染色体R带显带技术对患者骨髓进行染色体核型分析,并运用荧光原位杂交技术(FISH)进行PDGFRβ基因检测。收集检测结果,按荧光原位杂交信号结果分为扩增组、缺失组及易位组。对三组数据列交叉表进行统计分析,若样本容量n≥40且每格预期频数T均≥5,则使用Pearson卡方检验对三组数据进行组间比较;若n<40或任意一格预期频数T<5,则使用Fisher精确检验。若三组数据组间比较结果有差异,则进一步使用Bonferroni法对三组数据进行两两比较。 结果 PDGFRβ探针检测出PDGFRβ基因异常患者共98例,检出率为69.50%(98/141)。其中PDGFRβ基因扩增组38例(38.78%,38/98)、缺失组57例(58.16%,57/98)、易位组3例(3.06%,3/98)。98例病例中检出复杂核型93例,其中扩增组为37例(97.37%,37/38),缺失组为55例(96.49%,55/57),易位组为1例(33.33%,1/3)。分析三组的临床资料,PDGFRβ缺失组、扩增组与易位组无明显性别优势(P>0.05)。PDGFRβ缺失组以髓系肿瘤为主(P<0.001),如急性髓细胞白血病(AML)及骨髓增生异常综合征(MDS)等,PDGFRβ扩增组更多见于淋系肿瘤(P<0.001),如多发性骨髓瘤(MM)等,PDGFRβ易位组均见于骨髓增生异常/骨髓增殖性肿瘤(MDS/MPN)。 结论 伴有PDGFRβ基因重排的肿瘤兼有骨髓增殖性肿瘤(MPN)的过度增殖和MDS的病态造血改变,具有典型的临床和血液学特征。伴有PDGFRβ基因异常的肿瘤是一种较少见的血液系统肿瘤,除了以往髓系肿瘤MPN或MDS/MPN,也可覆盖于多发性骨髓瘤、非霍奇金淋巴瘤等淋巴/浆细胞肿瘤。 Objective To explore the clinical and laboratory characteristics of hematological tumors with different types of abnormalities in platelet derived growth factor β ( PDGFRβ) gene. Methods A retrospective analysis was carried out on 141 patients with abnormal long arm of chromosome 5 (5q) and comprehensive medical history data from Changhai Hospital Affiliated to Naval Medical University from 2009 to 2020, and their clinical data were collected. R-banding technique was used for chromosomal karyotyping analysis for the patient′s bone marrow, and fluorescence in situ hybridization (FISH) was used to detect the PDGFRβ gene. The results of detection were divided into the amplification group, deletion group, and translocation group based on FISH signals. The three sets of data column crosstabs were statistically analyzed, and if the sample size was n >= 40 and the expected frequency T for each cell was >= 5, a Pearson test was used to compare the three groups of data. If N < 40 and any of the expected frequency T for each cell was < 5, a Fisher′s exact test is used. Should there be a difference in the comparison results between the three sets of data, a Bonferroni method was further used to compare the data. Results In total 98 patients were detected to have PDGFRβ gene abnormalities with the PDGFRβ probe, which yielded a detection rate of 69.50% (98/141). Among these, 38 cases (38.78%) had PDGFRβ gene amplifications, 57 cases (58.16%) had deletions, and 3 (3.06%) had translocations. Among the 98 cases, 93 were found to have complex karyotypes, including 37 cases from the amplification group (97.37%, 37/38), 55 cases from the deletion group (96.49%, 55/57), and 1 case from the translocation group (33.33%, 1/3). Analysis of three sets of clinical data showed no significant gender preponderance in the groups (P>0.05). ThePDGFRβ deletion group was mainly associated with myeloid tumors, such as acute myeloid leukemia (AML) and myelodysplastic syndrome (MDS) (P<0.001). ThePDGFRβ amplification group was more common in lymphoid tumors, such as multiple myeloma (MM) (P<0.001). ThePDGFRβ translocation group was also more common in myelodysplastic/myeloproliferative tumors (MDS/MPN). Conclusion Tumors with PDGFRβ gene rearrangement may exhibit excessive proliferation of myeloproliferative tumors (MPN) and pathological hematopoietic changes in the MDS, and have typical clinical and hematological characteristics. As a relatively rare type of hematological tumor, in addition to previously described myeloid tumors such as MPN or MDS/MPN, it may also cover lymphoid/plasma cell tumors such as multiple myeloma and non-Hodgkin′s lymphoma.

    血小板衍生生长因子受体β染色体核型分析荧光原位杂交技术血液肿瘤

    MYC"阴性"伯基特淋巴瘤2例的遗传学分析

    吕瑞郑迎春安刚李承文...
    1340-1344页
    查看更多>>摘要:目的 对临床高度怀疑为伯基特淋巴瘤的2例患者进行多种遗传学分析,为诊断及治疗提供依据。 方法 应用G显带技术对患者进行染色体核型分析,采用分离探针及融合探针对患者染色体的特定位点进行间期细胞荧光原位杂交检测。 结果 分离探针检测未发现患者存在MYC基因异常,但通过三色双融合探针证实二者均包含IGH::MYC基因重排,结合患者的临床病理特征及靶向测序结果,2例患者均被确诊为伯基特淋巴瘤。 结论 MYC基因分离探针具有一定的局限性,需与融合探针联合进行检测,以提高诊断的准确性。 Objective To carry out combined genetic analysis on two patients suspected for Burkitt lymphoma to facilitate their diagnosis and treatment. Methods G banded karyotyping and interphase and metaphase fluorescence in situ hybridization (FISH) were used to detect the specific sites of chromosomes by using separate and fusion probes. Results The separate probe showed no presence of MYC gene abnormality, while fusion probe confirmed the IGH: : MYC translocation in the samples. Combined with the clinical features and pathological characteristics, the two patients were finally diagnosed with Burkitt lymphoma, which was confirmed by targeted capture next generation sequencing. Conclusion The separate probe for the MYC gene has some shortcomings and should be used together with dual fusion probe to improve the accuracy of diagnosis.

    荧光原位杂交伯基特淋巴瘤IGH::MYC基因重排

    瓜氨酸血症I型三个家系的临床及 ASS1基因变异分析

    董睿张开慧郭辉张光业...
    1345-1349页
    查看更多>>摘要:目的 对3个瓜氨酸血症I型(CTLN1)家系进行基因分析,总结中国CTLN1的临床和遗传学特征。 方法 将2017年至2020年就诊于山东大学附属儿童医院的3例患儿作为研究对象。采集3例患儿及父母的外周血样,对其DNA进行全外显子组测序,并对候选变异进行Sanger测序家系验证和致病性分析。 结果 3例患儿分别携带ASS1基因c.207_209delGGA和c.1168G>A、c.349G>A和c.364-1G>A、c.470G>A和c.970G>A复合杂合变异,其中c.207_209delGGA、c.364-1G>A既往未见报道。患儿父母均为杂合携带者。 结论 新发现的c.207_209delGGA、c.364-1G>A变异扩大了ASS1基因的变异谱。中国CTLN1患者的变异谱具有异质性。 Objective To analyze the clinical and genetic characteristics of three Chinese pedigrees affected with Citrullinemia type I (CTLN1). Methods Three children diagnosed at the Children's Hospital Affiliated to Shandong University from 2017 to 2020 were selected as the study subjects. Genomic DNA was extracted from peripheral blood samples of the probands and their parents. Next generation sequencing (NGS) was carried out to detect pathological variants of the probands. Sanger sequencing was used for validating the candidate variant among the pedigrees. Results The probands have respectively carried compound heterozygous variants of c. 207_209delGGA and c. 1168G>A, c. 349G>A and c. 364-1G>A, c. 470G>A and c. 970G>A of theASS1 gene, which were respectively inherited from their parents. Conclusion The newly discovered c. 207_209delGGA and c. 364-1G>A variants have enriched the mutational spectrum of theASS1 gene. And the mutation spectrum of Chinese CTLN1 patients is heterogeneous.

    瓜氨酸血症I型ASS1基因二代测序基因变异

    短肋胸廓发育不良3型两个家系的遗传学分析

    管鑫米欢李闪曹一璇...
    1350-1355页
    查看更多>>摘要:目的 对2例疑似短肋胸廓发育不良的胎儿进行致病变异鉴定和临床分型。 方法 在获取知情同意后,对引产胎儿进行全面检查,记录其临床表型。用常规酚-氯仿法提取胎儿皮肤组织及其父母外周血样的基因组DNA,通过全外显子组测序(WES)对其进行检测,对候选致病性变异进行Sanger测序家系验证;用VarCards在线软件分析变异的致病性,结合Swiss-PdbViewer预测变异对蛋白质三级结构的影响。 结果 两例胎儿均携带DYNC2H1基因的复合杂合变异。胎儿1为c.515C>A(p.Pro172Gln)和c.5983G>A(p.Ala1995Thr),胎儿2为c.5920G>T (p.Gly1974*)和c.9908T>C(p.Ile3303Thr)。两例胎儿的亲代均携带杂合变异。 结论 DYNC2H1基因的复合杂合变异很可能是两例胎儿的遗传学病因,二者均被确诊为SRTD3型。 Objective To explore the pathogenic variants and clinical classification of two fetuses with Short-rib thoracic dysplasia with or without polydactyly (SRTD). Methods With informed consent obtained, the phenotypic characteristics of the fetuses were comprehensively examined, and genomic DNA was extracted from fetal skin tissue and peripheral blood samples of the parents with conventional phenol-chloroform method. Whole exome sequencing (WES) was carried out on both fetuses, and the candidate variants were validated by Sanger sequencing. The pathogenicity of the candidate variants was analyzed using bioinformatic software VarCards, and the impact of the variants on the protein structure was predicted with Swiss-Pdb-viewer. Results Both fetuses were found to harbor compound heterozygous variants of the DYNC2H1 gene, including c. 515C>A (p.Pro172Gln) and c. 5983G>A (p.Ala1995Thr) in fetus 1, and c. 5920G>T(p.Gly1974*) and c. 9908T>C(p.Ile3303Thr) in fetus 2. The parents of both fetuses were heterozygous carriers. Conclusion The compound heterozygous variants of the DYNC2H1 gene probably underlay the SRTD3 in the two fetuses.

    短肋胸廓发育不良DYNC2H1基因变异分析

    X连锁显性Alport综合征两个家系 COL4A5基因的变异分析与产前诊断

    马骞车凌仪孔祥东鞠翠钰...
    1356-1359页
    查看更多>>摘要:目的 对2个X连锁显性遗传Alport综合征(AS)家系进行COL4A5基因变异分析与产前诊断。 方法 选取2018年9月和2020年1月就诊于郑州大学第一附属医院产前诊断中心的2个无亲缘关系的汉族AS家系为研究对象。采集2个家系的临床资料,抽取家系各成员外周静脉血样及胎儿羊水样品,联合采用高通量测序(NGS)与PCR-Sanger测序法对家系成员与胎儿的COL4A5基因进行检测,并对候选变异进行致病性分析。通过PCR扩增SRY基因确定胎儿的性别。 结果 基因检测结果显示家系1中的先证者及胎儿均携带COL4A5基因第32外显子c.2723G>A(p.Gly908Glu)变异;家系2中的先证者及胎儿2均携带COL4A5基因第44外显子c.3817G>A(p.Gly1273Asp)变异。根据美国医学与遗传学学会(ACMG)相关指南,COL4A5基因c.2723G>A(p.Gly908Glu)和c.3817G>A(p.Gly1273Asp)变异均被判定为疑似致病性变异(PP2+PM2_Supporting)。在排除母体污染的情况下,PCR扩增SRY基因显示两个胎儿均为男性。 结论 COL4A5基因c.2723G>A(p.Gly908Glu)和c.3817G>A(p.Gly1273Asp)变异可能分别为这2个AS家系的遗传学病因。在产前诊断中,PCR扩增SRY基因能够快速鉴定胎儿性别,有利于筛查与分析。该变异的发现丰富了COL4A5基因的变异谱,为探索AS基因型-临床表型相关性提供参考。 Objective To analysis variants of COL4A5 gene in two Chinese pedigrees affected with Alport syndrome (AS) and provide prenatal diagnosis for them. Methods Two unrelated ethnic Han Chinese pedigrees who had visited the First Affiliated Hospital of Zhengzhou University respectively in September 2018 and January 2020 were selected as the study subjects. Clinical data were collected, and genomic DNA was extracted from peripheral venous blood and amniotic fluid samples for genetic testing. Following next generation sequencing, candidate variants of the COL4A5 gene were verified by Sanger sequencing and bioinformatic analysis. The gender of the fetuses was determined by the presence of sex-determining region on Y (SRY). Results Genetic testing revealed that the proband and a fetus from pedigree 1 had both harbored a c. 2723G>A (p.Gly908Glu) variant in exon 32 of theCOL4A5 gene, whilst the proband and a fetus from pedigree 2 had both harbored a c. 3817G>A (p.Gly1273Asp) variant in exon 44 of theCOL4A5 gene. Based on the guidelines from the American College of Medical Genetics and Genomics (ACMG), both variants were classified as likely pathogenic (PP2+ PM2_Supporting). Following exclusion of maternal contamination, PCR amplification of the SRY region indicated that both fetuses were males. Conclusion The c. 2723G>A (p.Gly908Glu) and c. 3817G>A (p.Gly1273Asp) variants of theCOL4A5 gene probably underlay the AS in the two pedigrees. Detection of the SRY region can reliably identify the fetal sex, which is conducive to the prenatal diagnosis. Above results have also enriched the mutational spectrum of the COL4A5 gene and provided a reference for correlating the genotype and phenotype of the AS.

    Alport综合征COL4A5基因变异

    不平衡易位者17例的染色体微阵列分析

    高崇兰康涵李兴玉谢成秀...
    1360-1366页
    查看更多>>摘要:目的 回顾性分析17例染色体不平衡易位者的染色体微阵列分析(CMA)结果及其来源,供临床遗传咨询参考。 方法 回顾性分析2019年1月至2022年1月在成都市妇女儿童中心医院进行CMA检测的7 001例样本,2条非同源染色体末端存在1条缺失另1条重复或同时存在重复片段的纳入为不平衡易位者,并通过染色体核型或荧光原位杂交(FISH)检测其亲代来源。 结果 在7 001例样本中共筛选出17例不平衡易位者,17例不平衡易位者CMA结果中3例存在2条非同源染色体的重复片段,染色体总数为47条,多了1条衍生染色体,由重复的两个染色体片段组成;14例存在1条染色体末端的缺失另1条染色体末端的重复,其中10例有核型分析结果提示染色体总数为46条,存在1条衍生染色体,为缺失片段所在染色体,其缺失部分被重复的染色体片段替代。15例进行了来源分析,发现12例双亲之一存在染色体异常,包括11例平衡易位携带者和1例不平衡易位者,在减数分裂过程中形成了不平衡配子;3例双亲染色体正常,为新发变异导致的不平衡易位。 结论 CMA提示一条染色体末端缺失另一条染色体末端重复或者涉及两条染色体的重复片段时,建议验证双亲是否为平衡易位携带者,有利于遗传咨询指导再生育,评估再发风险。 Objective To retrospectively analyze the results of chromosomal microarray analysis (CMA) and parental origins of unbalanced translocations among 17 patients, so as to provide reference for their genetic counseling. Methods The results of CMA for 7 001 samples tested in Chengdu Women and Children′s Central Hospital from January 2019 to January 2022 were retrospectively reviewed. Unbalanced reciprocal translocation was defined as two non-homologous chromosomes with lost and gained segments respectively or both with gained segments, and their parental origins were identified by parental chromosomal karyotyping and/or fluorescence in situ hybridization (FISH). Results In total 17 unbalanced translocations were identified. In three cases, two non-homologous chromosomes both had gained segments, which constituted a derivative chromosome, with the total number of chromosomes being 47. In the remaining 14 cases, there was a terminal deletion on one chromosome and a terminal duplication on the other, 10 of which were confirmed by karyotyping, with the total number of chromosomes being 46. In the derivative chromosome, the lost segment was replaced by a gained segment from another chromosome. Among 15 cases undergoing parental origin analysis, 12 had paternal or maternal chromosomal abnormalities, including 11 balanced translocations and 1 unbalanced translocation. The unbalanced gametes therefore may form through meiosis. In 3 cases, the parental chromosomes were normal, indicating a de novo origin. Conclusion Discovery of terminal duplication and deletion or gained segments on two non-homologous chromosomes by CMA is suggestive of parental balanced translocation, which can facilitate genetic counseling and assessment the recurrence risk for subsequent pregnancies.

    不平衡易位染色体微阵列分析来源分析

    SOX10基因变异所致Waardenburg综合征4C型耳聋一个家系的基因检测及产前诊断

    李晶晶亢鸿飞孔祥东许芯...
    1367-1372页
    查看更多>>摘要:目的 探究1个Waardenburg综合征4C型(WS4C)耳聋家系的遗传学病因,并为该家系的胎儿进行产前诊断。 方法 选取2020年10月23日因双耳感音神经性聋就诊于郑州大学第一附属医院的1例女性耳聋先证者及其家系成员(2代3人)作为研究对象,收集先证者及其家系成员的临床资料。应用全外显子组测序对先证者进行基因检测,使用多重连接探针扩增(MLPA)方法对测序结果进行验证并对先证者父母和胎儿进行检测。 结果 先证者为1岁8个月女性,双耳极重度感音神经性聋,长期慢性便秘,双眼虹膜异色。先证者母亲为双耳极重度耳聋患者,双眼虹膜异色。先证者父亲听力正常,虹膜颜色正常。基因测序结果提示先证者存在SOX10基因第1~4外显子杂合缺失变异,先证者母亲及其胎儿检测到SOX10基因杂合缺失,父亲SOX10基因拷贝数正常。依据美国医学遗传学与基因组学学会遗传变异分类标准与指南,变异评级为致病性变异(PVS1+PM2_Supporting+PP1+PP4)。胎儿检测到该变异,将来发展为WS4C型耳聋患者的可能性大,先证者父母在遗传咨询后选择了引产。 结论 SOX10基因第1~4外显子杂合缺失变异考虑是该WS4C家系致病原因,可用于指导产前诊断。 Objective To explore the genetic basis for a Chinese pedigree featuring congenital profound syndromic deafness and chronic constipation, and provide prenatal diagnosis for a high-risk fetus. Methods Whole-exome sequencing was carried out to analyze the sequences of genes associated with hereditary deafness, and multiplex ligation-dependent probe amplification (MLPA) was used to verify the candidate variant in the proband′s parents and the fetus. Results The proband was found to have harbored a heterozygous deletion of SOX10, a pathogenic gene associated with Waardenburg syndrome type 4C (WS4C). The same deletion was found in her mother (with profound syndromic deafness and chronic constipation) and the fetus, but not in her father with normal hearing. Based on the guidelines from the American College of Medical Genetics and Genomics (ACMG) and Association for Molecular Pathology (AMP), the SOX10 gene deletion was predicted to be a pathogenic variant (PVS1+ PM2_Supporting+ PP1+ PP4). Conclusion The pedigree was diagnosed with WS4C, which has conformed to an autosomal dominant inheritance. Deletion of the entire SOX10 gene, as a loss-of-function variant, probably underlay its pathogenesis. Above finding has facilitated genetic counseling and prenatal diagnosis for this family.

    Waardenburg综合征4CSOX10基因基因诊断产前诊断