Genome-wide identification,bioinformatics and expression analysis of bZIP gene family of Ricinus communis
To understand the composition,evolutionary relationship and characteristics of Ricinus communis bZIP gene family members,bioinformatics was used to identify family members,analyze gene structure,protein conserved motifs,phylogenetic analysis,and analysis of protein physicochemical properties,phosphorylation sites,and interactions,as well as gene expression patterns and expression levels in tissues.The results showed that 46 members of the Ricinus communis bZIP gene family were identified,which were located on 10 chromosomes.The gene structure and protein conserved motifs were complex,which can be divided into 11 subfamilies,including 25 motifs.Similar to Arabidopsis,the evolution was more conservative;bZIP protein was a hydrophilic protein located in the nucleus,cell membrane and chloroplast.It played a biological role mainly through the phosphorylation of serine.The proteins RcbZIP18,RcbZIP27,RcbZIP2,RcbZIP17 and RcbZIP46 were associated with each other,participating in each growth cycle of Ricinus communis through the interaction between proteins.They are involved in the developmental regulation of leaf,stem,root and embryo during growth,RcbZIP10,RcbZIP25 and RcbZIP44 showed significant organizational differences in leaves and seeds These results provide references for the functional study of Ricinus communis bZIP gene family members.
Ricinus communis L.bZIP familybioinformatics analysisphylogenyexpression analysis
万方数据
维普
