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柴达木盆地达布逊盐湖微生物多样性研究

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本研究采用高通量测序与传统培养技术相结合的方式研究达布逊湖微生物的多样性.结果显示,达布逊盐湖中的细菌多样性与丰度远高于古菌.高通量测序所得的16S rRNA基因序列分别归属广古菌门(Euryarchaeota),放线菌门(Actinobacteria),拟杆菌门(Bacteroidetes),变形菌门(Proteobacteria)和疣微菌门(Verrucomicrobia).广古菌门序列占原核微生物(细菌与古菌之和)的5.5%,以嗜盐的盐杆菌科(Halobacteriaceae)为主,而属于放线菌门、拟杆菌门、变形菌门和疣微菌门的细菌序列分别占原核微生物的53.0%、25.8%、14.1%和1.6%.定量PCR结果显示,达布逊盐湖水体中的细菌和古菌16SrRNA基因丰度分别为3.27×107和4.35×104拷贝/毫升.培养分离获得的纯细菌菌株分别属于假单胞菌属(Pseudomonas)和芽孢杆菌属(Bacillus).古菌菌株则分别属于盐杆菌科的盐盒菌属(Haloarcula)、盐红菌属(Halorubrum)和盐棍菌属(Halorhabdus).本研究为青藏高原盐湖微生物资源的开发和利用提供了有利的数据支持.
Microbial Diversity in the Hypersaline Dabuxun Lake in Qaidam Basin, China
Microbial diversity in the water and sediment of the hypersaline Dabuxun Lake was investigated by using culture-dependent and-independent techniques including cultivation,quantitative polymerase chain reaction (qPCR),and 16S rRNA gene fragment 454 pyrosequencing.The qPCR results showed that in the water of the Dabuxun Lake the bacterial and archaeal 16S rRNA gene abundances were 3.27 × 107 and 4.35 × 104 copies/mL,respectively.The cultivation-based phylogenetic analysis showed that bacterial isolates were classified as Pseudomonas and Bacillus,and archaeal isolates were affiliated with three haloarchaeal genera:Haloarcula,Halorubrum,and Halorhabdus.The 454 pyrosequencing-based phylogenetic results showed that the major bacterial phyla were Actinobacteria,Bacteroidetes,Proteobacteria,and Verrucomicrobia,with each accounting for 53.0%,25.8%,14.1% and 1.6% of the total sequence reads,respectively.The dominant archaeal reads belong to Halobacteriaceae,accounting for 5.5 % of total reads.Our results gave a thorough understanding of the microbial composition in the hypersaline Dabuxun Lake.

Dabuxun Lakehalophilearchaeabacteriadiversity

赵婉雨、杨渐、董海良、吴耿、王尚、孙永娟、赖忠平、蒋宏忱

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中国地质大学,生物地质与环境地质国家重点实验室,北京100083

中国地质大学,生物地质与环境地质国家重点实验室,武汉430074

中国科学院,青海盐湖研究所,西宁810008

达布逊盐湖 嗜盐微生物 古菌 细菌 多样性

国家自然科学基金青年基金国家自然科学基金重点项目

4100212341030211

2013

地球与环境
中国科学院地球化学研究所

地球与环境

CSTPCDCSCD北大核心
影响因子:0.875
ISSN:1672-9250
年,卷(期):2013.41(4)
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