南方农业学报2023,Vol.54Issue(10) :3073-3082.DOI:10.3969/j.issn.2095-1191.2023.10.026

鼠源eIF4A1基因克隆及其原核/真核表达鉴定

Cloning of mouse eIF4A1 gene and its prokaryotic/eukaryotic expression identification

李梦茹 张文 段辰星 马良 栗朵朵 彭璟 梁晶晶 罗廷荣 李晓宁
南方农业学报2023,Vol.54Issue(10) :3073-3082.DOI:10.3969/j.issn.2095-1191.2023.10.026

鼠源eIF4A1基因克隆及其原核/真核表达鉴定

Cloning of mouse eIF4A1 gene and its prokaryotic/eukaryotic expression identification

李梦茹 1张文 1段辰星 1马良 1栗朵朵 1彭璟 1梁晶晶 1罗廷荣 1李晓宁1
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作者信息

  • 1. 广西大学动物科学技术学院/广西高校动物疫病预防与控制重点实验室,广西南宁 530004;广西兽用生物制品工程研究中心,广西南宁 530004
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摘要

[目的]克隆昆明小鼠真核生物翻译起始因子4A1基因(eIF4A1)并构建其原核/真核表达载体,探究其结构和生物学特性,为在体内外鉴定eIF4A1互作蛋白网络打下基础.[方法]以昆明小鼠脑组织总RNA反转录合成的cDNA为模板,PCR扩增鼠源eIF4A1基因编码区(CDS)序列,然后克隆到pGEX-4T-1和pcDNA3.0载体上分别构建原核/真核表达载体;利用大肠杆菌BL21(DE3)感受态细胞对原核表达载体进行诱导表达、纯化及鉴定;同时以真核表达载体转染HEK-293T细胞,通过Western blotting和间接免疫荧光(IFA)检测eIF4A1蛋白在HEK-293T细胞内的表达及分布情况;并以ProtParam、ProtScale、TMHMM-2.0、SignalP-5.0、SOPMA和SWISS-MODEL等在线软件对鼠源eIF4A1蛋白进行生物学信息分析.[结果]鼠源eIF4A1基因CDS序列长1221 bp,克隆到pGEX-4T-1载体能成功构建原核表达载体pGEX-4T-eIF4A1-Flag,在25和30℃下经0.5 mmol/L IPTG诱导均能大量表达出融合蛋白eIF4A1-Flag,且主要以包涵体形式存在.将鼠源eIF4A1基因克隆至pcDNA3.0载体成功构建获得真核表达载体pcDNA3.0-eIF4A1-Flag,以其转染HEK-293T细胞后,eIF4A1蛋白在HEK-293T细胞中成功表达,且主要分布在细胞质中.生物信息学分析结果表明,eIF4A1蛋白相对分子量为46.15408 kD,理论等电点(pI)为5.267,含有407个氨基酸残基;属于不稳定的亲水性非分泌蛋白,无跨膜结构,也没有信号肽,其二级结构以α-螺旋和无规则卷曲为主.鼠源eIF4A1蛋白的主要互作蛋白有10个,除eIFs家族蛋白外,还包括Paip1和Pdcd4互作蛋白.[结论]eIF4A1主要是分布在细胞质,为不稳定的亲水性非分泌蛋白,无跨膜结构和信号肽,通过构建原核/真核表达载体表达获得的融合蛋白eIF4A1-Flag可用于筛选和鉴定eIF4A1互作蛋白,为深入探究eIFs的结构及生物学功能提供技术支持.

Abstract

[Objective]To clone the Kunming mouse eukaryotic translation initiation factor 4A1 gene(eIF4A1)and construct its prokaryotic/eukaryotic expression vector to explore its structure and biological characteristics,and lay a foun-dation for the identification of eIF4A1 interacting protein network in vitro and in vivo.[Method]Using the cDNA synthe-sized by reverse transcription of total RNA of Kunming mouse brain tissue as template,mouse eIF4A1 gene coding region(CDS)sequence was amplified by PCR,and then cloned into pGEX-4T-1 and pcDNA3.0 vectors to construct prokaryo-tic/eukaryotic expression vectors,respectively.The prokaryotic expression vector was induced,purified and identified by Escherichia coli BL21(DE3)receptive cells.At the same time,HEK-293T cells were transfected with eukaryotic ex-pression vector,and the expression and distribution of eIF4A1 protein in HEK-293T cells were detected by Western blot-ting and indirect immunofluorescence(IFA).The biological information of mouse eIF4A1 protein was analyzed by Prot-Param,ProtScale,TMHMM-2.0,SignalP-5.0,SOPMA and SWISS-MODEL.[Result]The CDS sequence length of mouse eIF4A1 gene was 1221 bp,and the prokaryotic expression vector pGEX-4T-eIF4A1-Flag could be successfully con-structed by cloning pGEX-4T-1 vector.Fusion protein eIF4A1-Flag could be expressed in large quantities under the induc-tion of 0.5 mmol/L IPTG at 25 and 30℃,and it mainly existed in the form of inclusion bodies.The mouse eIF4A1 gene was cloned into pcDNA3.0 vector and the eukaryotic expression vector pcDNA3.0-eIF4A1-Flag was successfully con-structed.After transfecting HEK-293T cells with pcDNA3.0-eIF4A1-Flag,eIF4A1 protein was successfully expressed in HEK-293T cells and was mainly distributed in the cytoplasm.The results of bioinformatics analysis showed that the rela-tive molecular weight of eIF4A1 protein was 46.15408 kD,the theoretical isoelectric point(pI)was 5.267,and it con-tained 407 amino acid residues.It was an unstable hydrophilic non-secretory protein with no transmembrane structure and no signal peptide,and its secondary structure was dominated by α-helix and random coil.There were 10 main interacting proteins of mouse eIF4A1 protein,including Paip1 and Pdcd4 interacting proteins in addition to eIFs family proteins.[Conclusion]eIF4A1 is an unstable hydrophilic non-secreted protein which distributes mainly in cytoplasm,without trans-membrane structure and signal peptide.The fusion protein eIF4A1-Flag obtained by constructing prokaryotic/eukaryotic ex-pression vector can be used to screen and identify eIF4A1 interacting proteins.To provide technical support for further in-vestigation of the structure and biological function of eIFs.

关键词

鼠源/真核生物翻译起始因子(eIFs)/eIF4A1基因/原核表达/真核表达/生物信息学分析

Key words

mouse source/eukaryotic translation initiation factors(eIFs)/eIF4A1 gene/prokaryotic expression/eu-karyotic expression/bioinformatics analysis

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基金项目

国家自然科学基金项目(31902311)

出版年

2023
南方农业学报
广西壮族自治区农业科学院

南方农业学报

CSTPCDCSCD北大核心
影响因子:0.83
ISSN:2095-1191
被引量1
参考文献量7
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