首页|基于网络药理学探讨富马酸二甲酯治疗自身免疫性疾病的应用前景及作用机制

基于网络药理学探讨富马酸二甲酯治疗自身免疫性疾病的应用前景及作用机制

扫码查看
目的 应用网络药理学探讨多发性硬化(Multiple sclerosis,MS)的一线治疗药物富马酸二甲酯(Dimethyl Fumarate,DMF)治疗多种自身免疫性疾病的应用前景及潜在作用机制.方法 通过Pubchem检索DMF 2D、3D结构以及Canonical SMILES号,在Targetnet数据库预测其靶点并利用Uniprot(蛋白质数据库)进行靶点去重及标准化.综合GeneCards、DisGeNET、OMIM和TTD数据库对不同免疫疾病靶点进行汇总;Venny在线获取DMF靶点与不同免疫疾病靶点交集基因;交集基因结合STRING数据库和Cytoscape 3.8.2 软件进行PPI网络构建得到核心靶点;运用DAVID数据库对交集基因进行GO和KEGG富集分析;使用Cytoscape 3.8.2 软件绘制"药物-疾病-靶点-通路"关系网络图,Network Analysis分析图中各因素(节点)的关联性及重要性;利用AutoDock vina软件将核心成分与核心靶点分别进行分子对接,Pymol软件将对接结果可视化.结果 DMF潜在的作用靶点216 个,通过其中 19 个关键靶点治疗多种免疫性疾病,如银屑病(Psoriasis)、类风湿性关节炎(Rheumatoid arthritis,RA)、结肠炎、多发性硬化症(Multiple sclerosis,MS)、系统性硬化症(Systemic sclerosis,SSc)、系统性红斑狼疮(Systemic Lupus Erythematosus,SLE),重要靶点是MMP9、PTGS2、TNF等;GO富集分析,结果表明DMF对细胞分子功能、生物学功能及细胞组成均有影响,KEGG结果表明DMF调控上述功能主要与PI3K/AKT、TNF、NF-κB和IL-17 信号通路密切相关;分子对接结果显示DMF与核心靶点具有结合.结论 本研究基于网络药理学发现DMF通过多靶点、多通路分别从细胞水平和分子水平干预多种免疫性疾病发生发展,提示作为MS一线治疗药物DMF除MS治疗外,还具有治疗其他自身免疫性疾病的潜力,具有重要意义.
Perspective of Dimethyl Fumarate for Diverse Immune Diseases Treatment and Involvement in Mechanisms Based on Network Pharmacology
OBJECTIVE To explore the potential application and underlying mechanisms of dimethyl fumarate(DMF),a first-line drug for multiple sclerosis(MS),in the treatment of various autoimmune diseases using network pharmacology.METHODS 2D and 3D structures of DMF as well as Canonical SMILES were retrieved by Pub-chem,the target was predicted in the Targetnet database,and the duplicated target was removed and normalized by Uniprot(protein database).GeneCards,OMIM and TTD databases were used to summarize different immune disease targets.Venny online acquisition of DMF targets and different immune disease target intersection genes.The intersec-tion gene was combined with the STRING database and Cytoscape 3.8.2 software to construct a PPI network to obtain the core target.DAVID database was used for GO and KEGG enrichment analysis of intersection genes.Cytoscape 3.8.2 software was used to construct the"drug-disease-target-pathway"Network diagram,and Network Analysis was conducted to analyze the correlation and importance of each factor(node)in the diagram.AutoDock vina software was used to conduct molecular docking between core components and core targets respectively,and Pymol software visualized the docking results.RESULTS The potential targets of DMF were identified as 216,with 19 key targets being used to treat various immune-related diseases,including psoriasis,rheumatoid arthritis,colitis,multiple sclero-sis,systemic sclerosis,and systemic lupus erythematosus.The important targets include MMP9,PTGS2,and TNF.GO enrichment analysis showed that DMF had an impact on cell molecular function,biological function,and cell composi-tion.KEGG results showed that DMF regulation of these functions was mainly related to the PI3K/AKT,TNF,NF-κB,and IL-17 signaling pathways.Molecular docking results showed that DMF had binding activity with the core tar-gets.CONCLUSION This study discovered that DMF can intervene in the development of various immune-related diseases at both cellular and molecular levels through multiple targets and pathways.As a first-line drug for MS,DMF has the potential to treat other autoimmune diseases,which is of great significance.

Dimethyl fumarateAutoimmune diseaseNetwork pharmacologyMechanismMolecular docking

杨莹洁、黄鸣清、郑燕芳、陈剑钰

展开 >

福建中医药大学药学院,福建福州 350122

富马酸二甲酯 自身免疫性疾病 网络药理学 作用机制 分子对接

国家自然科学基金

81903629

2024

海峡药学
中国药学会福建分会

海峡药学

影响因子:0.643
ISSN:1006-3765
年,卷(期):2024.36(2)
  • 30