首页|球茎甘蓝MYB62转录因子的克隆与表达特征分析

球茎甘蓝MYB62转录因子的克隆与表达特征分析

扫码查看
为了明晰球茎甘蓝 MYB62 转录因子的序列特征及其在逆境胁迫后的表达特征,进一步探索球茎甘蓝MYB62 转录因子的生物学功能,为后续MYB62 转录因子功能鉴定提供理论依据,以球茎甘蓝为研究对象,采用同源克隆的方法获得球茎甘蓝MYB62 转录因子基因,并对其进行生物信息学分析,通过实时荧光定量PCR的方法分析MYB62 在球茎甘蓝不同组织间以及逆境胁迫后的表达特征。基因克隆结果表明,BocMYB62 基因 gDNA 全长1353 bp,CDS为837 bp,包括4 个外显子和3 个内含子,编码 278 个氨基酸。序列结构分析结果显示,BocMYB62 为亲水性蛋白,具有2 个SANT-MYB结构域,属于R2R3-MYB型MYB转录因子;空间结构预测显示其具有典型的α-螺旋结构;系统发育分析表明,BocMYB62 与甘蓝型油菜MYB62 亲缘关系最近。时空表达结果显示,BocMYB62 在绿色球茎甘蓝中的表达量始终高于在紫色球茎甘蓝中,且存在明显的组织特异性,在干旱胁迫后BocMYB62 表达量显著升高,胁迫12h表达量最高,低温胁迫后BocMYB62 表达量显著低于对照,在 4℃低温胁迫时表达量最低,推断Boc-MYB62 可能参与花青素生物合成调控,并可能参与逆境胁迫的调控作用。
Cloning and Expression Analysis of MYB62 Transcription Factors from Kohlrabi
In order to clarify the sequence characteristics of the MYB62 transcription factor,expression changes after stress,and further explore the biological function of the MYB62 transcription factor,kohlrabis were used as plant materials.MYB62 transcription factors were obtained by homologous cloning method and bioinformatics was analyzed.Spatiotemporal expression analysis of MYB62 and its expression after stress were performed by Real-time PCR.Results of gene cloning showed that gDNA length of BocMYB62 gene was 1353 bp,the length of CDS was 837 bp,which contained four exons and three introns and encoded 278 amino acids.The sequence structure analysis showed that BocMYB62 was a hydrophilic protein with two SANT-MYB domains,belonging to the R2R3-MYB type in the MYB transcription factor family.The spatial structure prediction revealed a typical α-helix structure.Phyloge-netic analysis indicated that BocMYB62 was closely related to MYB62 in Brassica napus.The spatiotemporal expres-sion results showed that BocMYB62 was consistently higher in green kohlrabi than that in purple with clear tissue spe-cificity.The expression of BocMYB62 was significantly increased during drought stress with the highest expression un-der 12 h.The BocMYB62 expression was significantly lower than control and the lowest at 4℃ cold stress.These re-sults inferred that BocMYB62 may be involved in the regulation of anthocyanin biosynthesis and the regulation of stress.It provides a theoretical basis for the subsequent functional identification of MYB62 transcription factors.

KohlrabiMYB62Sequence analysisConversed motifsRelationshipReal-time PCR

王鑫淼、赵孟良、邵登魁、尕桑、任延靖

展开 >

青海大学 青海省蔬菜遗传与生理重点实验室,青海 西宁 810016

青海大学 省部共建三江源生态和高原农牧业国家重点实验室,青海 西宁 810016

玉树藏族自治州农牧业综合服务中心,青海 玉树 815000

球茎甘蓝 MYB62 序列分析 保守基序 亲缘关系 荧光定量PCR

国家大宗蔬菜产业技术体系建设项目科技成果转化专项青海省"高端创新人才千人计划"项目

CARS-23-G262023-NK-144K9923197

2024

华北农学报
河北,北京,天津,山西,河南,内蒙古六省市农科院农学会

华北农学报

CSTPCD北大核心
影响因子:1.067
ISSN:1000-7091
年,卷(期):2024.39(2)
  • 41