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对硝基苯酚降解产物与FK506结合蛋白相互作用分子机制

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对硝基苯酚(p-nitrophenol,p-NP)作为典型内分泌干扰物,其环境污染与人体健康问题一直是环境领域的研究热点。环境中对硝基苯酚降解产物(p-NP degradation products,p-NP-DPs)与FK506结合蛋白(FK506 binding protein,FKBP5)结合形成p-NP-DPs-FKBP5加合物是p-NP-DPs产生雌激素和抗雄激素活性的主要机制。然而,p-NP-DPs与FKBP5相互作用的分子水平机制尚未引起足够的重视。本文采用分子对接技术模拟计算p-NP-DPs与FKBP5相互作用的结合能和结合面积。结果表明,p-NP-DPs与FKBP5相互作用结合面积顺序为213 Å2(4-硝基邻苯二酚)>200 Å2(p-NP)>184 Å2(邻苯二酚)>175 Å2(对苯二酚)>173 Å2(苯酚)>171 Å2(对苯醌),结合能顺序为-3。69 kcal mol-1(4-硝基邻苯二酚)>-3。76 kcal·mol-1(p-NP)>-3。81 kcal·mol-1(对苯二酚/邻苯二酚)>-3。83 kcal mol-1(对苯醌)>-3。91 kcal·mol-1(苯酚),高频氨基酸残基为 Pro221、Gly224、Glu227、Ala228、Gly282、Lys283、Tyr284、Met285和Gln286,p-NP-DPs药效团主要包括氢键供体(—OH)、氢键受体(—NO2和C=O)、芳香中心(苯环)和疏水中心(C原子)。p-NP-DPs理化性质对p-NP-DPs与FKBP5相互作用强度的影响主要取决于分子量和拓扑极表面积(100%)、氢键受体数量(75%)、密度(50%)和闪点(25%)。本研究对认识水环境中p-NP-DPs分子水平健康效应和环境风险具有重要科学意义。
Molecular mechanism on interaction between p-nitrophenol degradation products and FK506 binding protein
P-nitrophenol(p-NP),as typical endocrine disruption chemicals(EDCs),their environmental pollution and human health issues have always been hotspots in the environmental field.The p-NP-DPs-FKBP5 adducts,formed by p-NP degradation products(p-NP-DPs)and FK506 binding protein(FKBP5),is the main estrogenic and anti-androgenic mechanism.However,this molecular-level mechanism between p-NP-DPs and FKBP5 has not attracted enough attention.In this study,the molecular docking technology was used to simulate the binding energy and binging area between p-NP-DPs and FKBP5 interaction.The results indicated that the order of binging area between p-NP-DPs and FKBP5 interaction was 213 Å2(4-nitrocatechol)>200 Å2(p-NP)>184 Å2(o-dihydroxybenzene)>175 Å2(p-dihydroxybenzene)>173 Å2(phenol)>171 Å2(p-benzoquinone),but the order of binding energy between p-NP-DPs and FKBP5 interaction was-3.69 kcal·mol-1(4-nitrocatechol)>-3.76kcal·mol-1(p-NP)>-3.81 kcal·mol-1(p-/o-dihydroxybenzene)>-3.83 kcal·mol-1(p-benzoquinone)>-3.91 kcal·mol-1(phenol).The high frequency amino acid residues were included Pro221,Gly224,Glu227,Ala228,Gly282,Lys283,Tyr284,Met285 and Gln286.The pharmacophores of p-NP-DPs were included hydrogen-bond donor(—OH),hydrogen-bond acceptor(—NO2 and C=O),aromatic center(benzene ring)and hydrophobic center(C atom).The physicochemical properties of p-NP-DPs were dependent on molecular weight and topological polar surface area(100%),hydrogen bond donor count(75%),density(50%)and flash point(25%).The research results probably enhance people's knowledge and understanding of molecular-level health effects and environmental risks of p-NP-DPs in the water environmental system in the future.

p-NPFKBP5molecular dockingpharmacophorestructure-activity relationship

杨传玺、王小宁、朱青、薛岩、刘琳、刘永林、谢康、陈栋、孙好芬、王炜亮

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青岛理工大学环境与市政工程学院,青岛,266520

山东省创新发展研究院,济南,250101

青岛理工大学管理工程学院,青岛,266520

济南大学土木建筑学院,济南,250022

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对硝基苯酚 FK506结合蛋白 分子对接 药效团 构效关系

国家自然科学基金国家自然科学基金

4220701941672340

2024

环境化学
中国科学院生态环境研究中心

环境化学

CSTPCD北大核心
影响因子:1.049
ISSN:0254-6108
年,卷(期):2024.43(5)
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