首页|基于数据库挖掘分析BIRC5基因在卵巢癌中的表达及意义

基于数据库挖掘分析BIRC5基因在卵巢癌中的表达及意义

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目的:通过生物信息学方法,筛选可能与卵巢癌诊断、预后及免疫浸润相关的基因.方法:从GEO数据库中下载数据集,并筛选出卵巢癌差异基因,通过STRING数据库和Cytoscape软件筛选出核心基因BIRC5.通过GEPIA和UALCAN数据库分析BIRC5表达水平与预后关系以及其表达与卵巢癌患者临床特征之间的关系.TIMER数据库分析BIRC5与卵巢肿瘤免疫细胞浸润的相关性.LinkedOmics和DAVID数据库分析BIRC5基因的正相关基因和KEGG通路.结果:筛选出卵巢癌相关的核心基因18个,包括BIRC5.BIRC5在卵巢癌中的表达均高于正常组织(均P<0.05),且在分期和淋巴结转移方面比较,差异均具有统计学意义(均P<0.05).BIRC5高表达组患者5年生存率高于低表达组(P<0.05).BIRC5基因参与卵巢癌肿瘤细胞的免疫浸润.KEGG通路显示BIRC5主要参与细胞周期、人类T细胞白血病病毒1型感染、卵母细胞减数分裂、细胞衰老、p53信号通路、孕酮介导的卵母细胞成熟、细胞外基质受体互作、蛋白消化和吸收等信号通路.结论:BIRC5为卵巢癌诊断及预后相关基因,参与多种分子调控通路,可作为卵巢癌潜在的生物标志物.
Analysis of the expression and clinical significance of BIRC5 gene in ovarian cancer based on database mining
Objective:To screen genes related to the diagnosis,prognosis,and immune invasion of ovarian cancer by bioinformatics methods.Methods:Data sets were downloaded from the GEO database,and differential genes of ovarian cancer were screened.Core gene BIRC5 was screened through the STRING database and Cytoscape software.The relationship between the expression level of BIRC5 and prognosis,as well as the relationship between its expression and clinical characteristics of ovarian cancer patients were analyzed through GEPIA and UALCAN databases.TIMER database was used to analyze the correlation between BIRC5 and immune cell infiltration of ovarian tumors.LinkedO-mics and DAVID databases were adopted to analyze the positive correlation gene of the BIRC5 gene and KEGG pathway.Results:Eighteen core genes related to ovarian cancer were screened,including BIRC5.The expression of BIRC5 in ovarian cancer was higher than that in normal tissues(all P<0.05),and the difference in staging and lymph node metastasis was statistically significant(all P<0.05).The 5-year survival rate of patients with high BIRC5 expression was lower than that of pa-tients with low BIRC5 expression(P<0.05).BIRC5 gene was involved in the immune invasion of ovarian cancer cells.KEGG pathway shows that BIRC5 is mainly involved in the cell cycle,human T-cell leukemia virus type 1 infection,oocyte meiosis,cell senescence,p53 signal pathway,progesterone mediated oocyte maturation,extracellular matrix receptor interaction,protein digestion and absorption,and other signal pathways.Conclusion:BIRC5 is a gene related to the diagnosis and prognosis of ovarian cancer.It participates in multiple molecular regulatory pathways and can be used as a potential biomarker of ovarian cancer.

Ovarian CancerBioinformaticsDifferentially Expressed GenesPrognosisIm-mune InfiltrationBIRC5

武福文、洪莉

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武汉大学人民医院妇产科 湖北 武汉 430060

卵巢癌 生物信息学 差异表达基因 预后 免疫浸润 BIRC5

国家自然科学基金面上项目国家自然科学基金面上项目湖北省第二届医学领军人才工程第二层次基金资助课题

8177156281971364[2019]47号

2024

武汉大学学报(医学版)
武汉大学

武汉大学学报(医学版)

CSTPCD
影响因子:0.959
ISSN:1671-8852
年,卷(期):2024.45(3)
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