首页|污水中肺炎克雷伯氏菌噬菌体的分离及其生物学特征、基因组分析

污水中肺炎克雷伯氏菌噬菌体的分离及其生物学特征、基因组分析

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为探究噬菌体作为治疗肺炎克雷伯菌感染的新型潜在疗法的可能性,本研究采用双层平板法将医院周边污水中3株肺炎克雷伯菌裂解性噬菌体进行分离纯化,透射电镜观察噬菌体形态结构,并进一步分析噬菌体裂解谱、最佳感染复数、生长曲线和酸碱耐受性等生物学特征,同时通过测序技术获得噬菌体全基因组信息并注释分析。实验结果表明,KP-ZS3为肌尾科噬菌体,KP-ZS4为短尾科噬菌体,KP-ZS6为长尾科噬菌体,且KP-ZS4的感染潜伏期稍长,KP-ZS3耐酸碱能力较强,KP-ZS6的裂解能力为3株噬菌体中最强、裂解谱较宽。3株噬菌体的外壳蛋白组分大小均在33~55 kD之间。此外全基因组分析发现KP-ZS3、KP-ZS6 2株噬菌体的基因组大小均在100 kb以上,噬菌体KP-ZS4的基因组相对较小(40 608 bp)。共线性分析显示噬菌体KP-ZS3与phiEap-3、Kp15高度相似;KP-ZS6与0507KN21、vB_EcoM_KWBSE43-6高度相似。KP-ZS4与Tyrion、TL-2011b相似度相对较低,序列一致性为76。77%、76。89%。以上结果表明,这3株噬菌体具有独特的生物学特性和基因组特征,它们在肺炎克雷伯菌感染治疗方面展现出不同的潜力和优势,特别是KP-ZS6因其裂解能力强和广泛的裂解谱,以及KP-ZS3因其强耐酸碱性,可能成为未来抗菌治疗的备用资源,这些发现为开发新型抗菌策略和治疗肺炎克雷伯菌感染提供了新的信息基础。
Isolation of Klebsiella pneumoniae phage from sewage and analyses its biological and genomic characteristics
To explore the potential of phages as a novel therapeutic approach for Klebsiella pneumoniae infec-tions,this study employed the double-layer plate method to isolate and purify three strains of lytic Klebsiella pneumoniae phages from the sewage surrounding the hospital.The morphological structure of the phages was observed using transmission electron microscopy,and further analysis was conducted on their biological char-acteristics,including lytic spectrum,optimal infection multiplicity,growth curve,and acid-base tolerance.Additionally,sequencing technology was utilized to obtain and annotate the complete genomic information of the phages.Experimental results indicate that KP-ZS3 is a Myoviridae phage,KP-ZS4 is a Podoviridae phage,and KP-ZS6 is a Siphoviridae phage.KP-ZS4 has a slightly longer latent period of infection,KP-ZS3 has a stronger acid-base tolerance,and KP-ZS6 has the strongest lytic capability and the broadest lytic spec-trum among the three phages.The capsid protein components of all three phages are within the range of 33 kD to 55 kD.Moreover,genomic analysis revealed that the genomes of KP-ZS3 and KP-ZS6 are both larger than 100 kb,with the genome of phage KP-ZS4 being relatively smaller(40608 bp).Comparative genomic analysis shows that phage KP-ZS3 is highly similar to phiEap-3 and Kp15;KP-ZS6 is highly similar to 0507KN21 and vB_EcoM-KWBSE43-6.KP-ZS4 has a relatively lower similarity to Tyrion and TL-2011b,with sequence identities of 76.77%and 76.89%,respectively.These results suggest that these three phages possess unique biological characteristics and genomic features,demonstrating different potentials and advan-tages in the treatment of Klebsiella pneumoniae infections.In particular,KP-ZS6,with its strong lytic ability and broad lytic spectrum,and KP-ZS3,with its strong acid-base tolerance,may serve as alternative re-sources for future antibacterial treatments.These findings provide a new informational basis for the develop-ment of novel antibacterial strategies.

Klebsiella pneumoniaePhageBiological characterizationGenomic analysisDrug-resistant bacteria treatment

邵瑞瑞、周青帅、崔古贞、廖健、程玉梅、官志忠、齐晓岚、洪伟

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贵州医科大学 地方病与少数民族疾病教育部重点实验室&贵州省医学分子生物学重点实验室,贵阳 550001

贵州医科大学基础医学院 贵州省普通高等学校病原生物学特色重点实验室,贵阳 550004

贵州医科大学口腔医学院/附属口腔医院,贵阳 550001

贵州医科大学附属医院综合 ICU,贵阳 550001

省部共建地方病及民族区域性疾病防控协同创新中心,贵阳 550001

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肺炎克雷伯菌 噬菌体 生物学特征 基因组分析 耐药菌治疗

国家自然科学基金国家自然科学基金贵州省自然科学基金贵州医科大学优秀青年人才计划

32170134U1812403[2020]1Z067[2022]101

2024

四川大学学报(自然科学版)
四川大学

四川大学学报(自然科学版)

CSTPCD北大核心
影响因子:0.358
ISSN:0490-6756
年,卷(期):2024.61(4)
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