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Ai2NU: A Cytoscape plugin for uniformization of biomolecular accession identifiers

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Cytoscape is one of the most popular platforms for biomolecular networks research.However Cytoscape cannot display biomolecular names according to their accession identifiers in different databases.A plugin named Ai2NU is designed and implemented in this paper.It can make biomolecular names displayed automatically in biomolecular networks graphs in Cytoscape by constructing a local dictionary.It is convenient for researchers to recognize biomolecules and enhance the research efficiency.

Cytoscapebiomolecular networksbiomolecular accession identifiervisualization

XIE Jiang、TAN Jun、YI Rong-gui、CHENG Xiao、WANG Xing-wang、ZHANG Wu

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School of Computer Engineering and Science, Shanghai University, Shanghai 200072, P.R.China

Shanghai Leading Academic Discipline ProjectPh D Programs Foundation of Ministry of Education of ChinaInnovation Program of Municipal Education Commission of Shanghai MunicipalityInnovation Foundation of Shanghai University

J501032008028000711Y203

2011

10.1007/s11741-011-0768-1

上海大学学报(英文版)
上海大学

上海大学学报(英文版)

影响因子：0.196
ISSN：1007-6417
年,卷(期)：2011.15(5)
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