德氏乳杆菌与嗜热链球菌ISL3家族转座子的比较与分析
Comparison and analysis of the ISL3 family between Lactobacillus delbrueckii and Streptococcus thermophilus
段景秀 1宋磊1
作者信息
- 1. 上海师范大学生命科学学院,上海 200234
- 折叠
摘要
对存在于德氏乳杆菌(Lactobacillus delbrueckii)和嗜热链球菌(Lactobacillus delbrueckii)中的3类ISL3家族转座子进行了筛选和定位,确定了各自的反向重复序列(IRs)和其外部的正向重复序列(DRs).观察到3类转座子的IRs有部分相同(5'-GGCTCTATAATTT-3'//5'-TTGACAAAGAGCC-3'),碱基A和T丰富的8 bp的DRs中保守碱基均为第5位T.3类转座子中,转座酶之间约30％的相同性,与IRs的部分相同性以及对最保守碱基的识别有关.分析结果为后续进行相关的分子实验与研究或建立简单转座子的数据库打下基础.
Abstract
In this study,three types of ISL3 family transposons in Lactobacillus delbrueckii and Streptococcus thermophilus are screened and localized.Their inverted repeat sequences(IRs)and external direct repeat sequences(DRs)were determined.Notably,the IRs of the three types of IRs partially shared the sequence 5'-GGCTCATAATTT-3'//5'-TTGACAAGAGCC-3',and the 5th T was identified as the most conserved base in the 8 bp AT-rich DRs.Approximately 30％similarity among the three types of transposases in the ISL3 family transposons was attributed to the partial similarity of IRs and the recognition of the most conservative base of DRs.These findings will serve as a foundation for subsequent molecular experiments,research,or the establishment of a database on simple transposons.
关键词
德氏乳杆菌(Lactobacillus/delbrueckii)/嗜热链球菌(Lactobacillus/delbrueckii)/ISL3/家族转座子/反向重复序列(IRs)/正向重复序列(DRs)保守碱基Key words
Lactobacillus delbrueckii/Streptococcus thermophilus/ISL3 family transposons/inverted repeat sequences(IRs)/conservative base of the direct repeat sequences(DRs)引用本文复制引用
出版年
2024
NETL
NSTL
万方数据