世界中医药2023,Vol.18Issue(24) :3500-3507.DOI:10.3969/j.issn.1673-7202.2023.24.004

滋肾育胎丸防治早发性卵巢功能不全的转录组和生物信息学研究

Research on Transcriptome and Bioinformatics of Zishen Yutai Pills for Prevention and Treatment of Premature Ovarian Insufficiency

党蕾 董盈盈 张春波 宁娜 栗妍 苏碧茹 黄秋凌 王世宣
世界中医药2023,Vol.18Issue(24) :3500-3507.DOI:10.3969/j.issn.1673-7202.2023.24.004

滋肾育胎丸防治早发性卵巢功能不全的转录组和生物信息学研究

Research on Transcriptome and Bioinformatics of Zishen Yutai Pills for Prevention and Treatment of Premature Ovarian Insufficiency

党蕾 1董盈盈 2张春波 3宁娜 2栗妍 4苏碧茹 2黄秋凌 2王世宣4
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作者信息

  • 1. 华中科技大学同济医学院附属同济医院,武汉,430030;广州医药集团有限公司博士后科研工作站,广州,510130;广州白云山中一药业有限公司,广州,510530
  • 2. 广州白云山中一药业有限公司,广州,510530
  • 3. 广州医药集团有限公司博士后科研工作站,广州,510130;广州白云山中一药业有限公司,广州,510530
  • 4. 华中科技大学同济医学院附属同济医院,武汉,430030
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摘要

目的:通过转录组与生物信息学结合解析滋肾育胎丸防治早发性卵巢功能不全的关键机制.方法:滋肾育胎丸对早发性卵巢功能不全小鼠模型行预防给药,采用二代高通量测序技术对模型组和给药组小鼠卵巢组织行转录组测序,应用基因本体(GO)富集分析和京都基因和基因组百科全书(KEGG)行生物功能富集分析,通过蛋白质-蛋白质相互作用(PPI)分析方法预测靶基因.采用实时荧光定量PCR(qRT-PCR)技术验证转录组预测靶基因结果的一致性.结果:给药组较模型组,雌激素、抗米勒管激素和卵巢系数升高,组织中不同发育阶段卵泡数目增加;转录组学结果显示,2组间差异表达基因共57个.GO富集分析发现,差异表达基因涉及调控补体和凝血级联反应等通路;KEGG富集分析发现,差异表达基因涉及胆固醇代谢和脂肪消化与吸收等信号通路.PPI与KEGG富集通路结果中重合基因有Apob、Fga、Plg、Fgb、Apoh,是潜在的靶基因;qRT-PCR验证发现,滋肾育胎丸明显升高Fga和Fgb mRNA表达,降低Apob、Plg、Apoh mRNA表达.结论:滋肾育胎丸可通过Fga、Plg、Fgb调控补体和凝血级联反应通路,Apob和Apoh调控胆固醇代谢和脂肪消化与吸收,进而发挥防治早发性卵巢功能不全作用.

Abstract

Objective:To explore the pivotal mechanisms of Zishen Yutai Pills for the prevention and treatment of premature ovari-an insufficiency(POI)based on transcriptome and bioinformatics.Methods:The POI mice models were administered with Zishen Yutai Pills(ZYP)as preventative medicine.The transcriptomes of ovarian tissue from the model and the ZYP treatment groups were sequenced by the second-generation high-throughput sequencing platform.Gene Ontology(GO)enrichment analysis and the Kyoto Encyclopedia of Genes and Genomes(KEGG)were used for biological functional enrichment analysis,and target genes were predic-ted by protein-protein interaction(PPI)analysis.The consistency of the predicted target gene results of the transcriptome was veri-fied by real-time fluorescent quantitative PCR(qRT-PCR).Results:Compared with the model group,the estradiol,anti-Müllerian hormone,and ovarian coefficient increase in the ZYP treatment group,and the number of follicles in tissue in different developmen-tal stages increases.Transcriptomics results show that there are 57 differentially expressed genes(DEGs)between the two groups.GO analysis shows that DEGs are involved in regulating complement and coagulation cascade reaction pathways,while KEGG analy-sis finds that DEGs are involved in cholesterol metabolism,fat digestion and absorption,and other signaling pathways.The over-lapped genes,Apob,Fga,Plg,Fgb,and Apoh,between PPI and KEGG analysis results are predicted as the potential target genes.qRT-PCR results show that ZYP significantly increases the mRNA expressions of Fga and Fgb and decreases the mRNA expressions of Apob,Plg,and Apoh.Conclusion:ZYP can regulate complement and coagulation cascade reaction pathway through Fga,Plg,and Fgb and cholesterol metabolism and fat digestion and absorption through Apoh and Apob,so as to prevent and treat POI.

关键词

滋肾育胎丸/防治早发性卵巢功能不全/转录组学/生物信息学/中药/调控补体和凝血级联反应/胆固醇代谢/脂肪消化与吸收

Key words

Zishen Yutai Pills/Prevention and treatment of premature ovarian insufficiency/Transcriptome/Bioinformatics/Tra-ditional Chinese medicine/Regulation of complement and coagulation cascade reaction/Cholesterol metabolism/Fat digestion and absorption

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基金项目

国家自然科学基金(82002768)

广东省名优中成药二次开发项目(20174002)

出版年

2023
世界中医药
世界中医药学会联合会

世界中医药

CSTPCDCHSSCD北大核心
影响因子:1.266
ISSN:1673-7202
参考文献量7
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