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H5Nx禽流感病毒交叉反应性CD4+T细胞表位预测

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[目的]评估预先存在的H5Nx交叉反应性免疫记忆,为人类H5 禽流感病毒的防治和广谱疫苗的研发提供理论数据.[方法]利用生物信息学方法筛选人源H5Nx禽流感病毒与季节性流感病毒的共同保守的交叉反应性CD4+T细胞表位,进一步分析保守表位嵌套CD8+T细胞表位和B细胞表位情况以及在中国人群中的覆盖率.[结果]92.3%(513/555)的H5Nx CD4+T细胞表位在季节性甲型流感病毒中具有交叉反应性,其中 172 个表位嵌套CD8+T细胞表位和 5 个表位嵌套B细胞表位.这些表位与相应HLA-DRB1 等位基因在全世界人群中的覆盖率为 88.65%.[结论]由于反复接触季节性甲型流感病毒,人群中存在一定水平的的H5Nx交叉反应性免疫记忆,能够为H5Nx感染提供部分保护.
Prediction of H5Nx Avian Influenza Virus Cross-reactivity CD4+T-cell Epitopes
[Objective]To evaluate preexisting H5Nx cross-reactivity immune memory and to provide theoretical data for the prevention and treatment of human H5 avian influenza viruses and the development of broad-spectrum vaccines.[Method]Bioinformatics methods were used to screen the common conserved cross-reactivity CD4+T cell epitopes of human H5Nx avian influenza viruses and seasonal influenza viruses,and further analysis of the nested CD8+T cell epitopes and B cell epitopes of conserved epitopes and their coverage among the Chinese population.[Result]92.3%(513/555)of H5Nx CD4+T cell epitopes were cross-reactivity in seasonal influenza A viruses,of which 172 epitopes nested CD8+T cell epitopes and 5 epitopes nested B cell epitopes.These epitopes and the corresponding HLA-DRB1 alleles have a strong coverage rate of 88.65%in the world population.[Conclusion]Due to repeated exposure to seasonal influenza A viruses,there is a certain level of H5Nx cross-reactivity immune memory in the population that may provide partial protection from H5Nx infection.

H5Nx influenza virusco-conservedcross-reactivityCD4+T-cell epitopesnested epitopes

谢爽、陈瑶、黄俊琼

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遵义医科大学检验医学院,遵义 563000

隆昌市人民医院检验科,隆昌 642150

H5Nx流感病毒 共同保守 交叉反应性 CD4+T细胞表位 嵌套表位

国家自然科学基金遵义市科学技术基金

81860376遵市科合HZ字202141号

2024

生物技术通报
中国农业科学院农业信息研究所

生物技术通报

CSTPCD北大核心
影响因子:0.505
ISSN:1002-5464
年,卷(期):2024.40(5)