首页|响应NO的藜麦CHX基因家族在盐碱胁迫下的表达模式

响应NO的藜麦CHX基因家族在盐碱胁迫下的表达模式

Expression Patterns of CHX Gene Family in Quinoa in Response to NO under Saline-alkali Stress

扫码查看
[目的]CHX(cation/H+exchanger)基因家族是植物特有的一价阳离子转运蛋白,在植物的生长发育、盐碱胁迫响应中发挥重要作用.从藜麦全基因组范围内鉴定CHX基因家族成员,分析相关基因表达特点,为后续CHX基因功能深入研究提供支撑.[方法]利用生物信息学方法,从藜麦基因组中鉴定CHX基因家族成员,并对其理化特性、系统进化关系、染色体定位、基因复制、基因结构和启动子区顺式作用元件等进行分析.利用转录组数据结合RT-qPCR分析CHX家族基因在混合盐碱胁迫和外源NO处理下不同器官的表达模式.采用烟草瞬时转化法检测目标蛋白的亚细胞定位情况.[结果]在藜麦基因组中共鉴定到51个CHX基因,系统发育分析将CHX家族划分为5个亚族.片段复制是CHX基因家族进化的主要原因,该基因家族经历了强烈的纯化选择.在转录组分析基础上,对其中10个CHX基因在盐碱胁迫和NO处理下的RT-qPCR鉴定分析表明,除CqCHX-10和CqCHX-25不表达以外,其余8个基因均在茎和根系中响应盐碱胁迫,并受到外源NO的正向调控.进一步对CqCHX-17蛋白亚细胞定位发现,该基因定位于细胞核和叶绿体.[结论]从藜麦基因组中鉴定出51个CHX家族成员.不同成员在不同组织中表现出不同的表达模式.CHX基因家族成员对盐碱胁迫和外源NO正向响应,CqCHX-17可能参与K+转运,并参与叶绿体基质pH调节.
[Objective]CHX(cation/H+exchanger)gene family is a unique monovalent cationic transporter and plays an important role in plant growth and development and response to salt-alkali stress.The CHX gene family members were identified from the whole genome of quinoa,and the expression characteristics of related genes were analyzed to provide support for further research on CHX gene function.[Method]Bioinformatics methods were used to identify the CHX gene family members from quinoa genome,and to analyze their physicochemical properties,phylogenetic relationships,chromosome localization,gene replication,gene structure and promoter cis-acting elements.Transcriptome data combined with RT-qPCR were used to analyze the expression patterns of CHX family genes in different organs under mixed saline-alkali stress and exogenous NO treatment.Transient transformation of tobacco was used to detect the subcellular localization of target protein.[Result]A total of 51 CHX genes were identified in quinoa genome,and the CHX family was divided into 5 subfamilies by phylogenetic analysis.Fragment replication was the primary reason for the evolution of the CHX gene family,which has undergone intense purification selection.Based on the transcriptomic analysis,RT-qPCR analysis of 10 CHX genes under salt-alkali stress and NO treatment showed that the other 8 genes were all in response to salt-alkali stress in stems and roots and were positively regulated by exogenous NO except CqCHX-10 and CqCHX-25 were not expressed.Further subcellular localization of CqCHX-17 protein showed that the gene was localized in the nucleus and chloroplast.[Conclusion]Fifty-one CHX family members are identified from quinoa genome.Different members show different expression patterns in different organizations.CHX gene family members respond positively to saline-alkali stress and exogenous NO.It is found that CqCHX-17 may be involved in K+transport and pH regulation of chloroplast matrix.

quinoaCHXbioinformatics analysisexpression analysissaline-alkali stress

贾子健、王宝强、陈立飞、王义真、魏小红、赵颖

展开 >

甘肃农业大学生命科学技术学院,兰州 730070

省部共建干旱生境作物学重点实验室甘肃农业大学,兰州 730070

甘肃农业大学农学院,兰州 730070

藜麦 CHX 生信分析 表达分析 盐碱胁迫

2025

生物技术通报
中国农业科学院农业信息研究所

生物技术通报

北大核心
影响因子:0.505
ISSN:1002-5464
年,卷(期):2025.41(2)