实验动物科学2024,Vol.41Issue(1) :45-50.DOI:10.3969/j.issn.1006-6179.2024.01.009

基于16SrDNA测序技术分析实验用猫的肠道菌群特征

Analysis of Characteristics on Gut Microbiota of Laboratory Cats Based on 16S rDNA Sequencing

郑路 周子娟 侯正梓檀 李昶仪 王福金 陈军 王靖宇 董建一
实验动物科学2024,Vol.41Issue(1) :45-50.DOI:10.3969/j.issn.1006-6179.2024.01.009

基于16SrDNA测序技术分析实验用猫的肠道菌群特征

Analysis of Characteristics on Gut Microbiota of Laboratory Cats Based on 16S rDNA Sequencing

郑路 1周子娟 2侯正梓檀 2李昶仪 2王福金 2陈军 2王靖宇 2董建一2
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作者信息

  • 1. 大连医科大学附属第一医院,大连 116044
  • 2. 大连医科大学实验动物中心,大连 116044
  • 折叠

摘要

目的 通过 16S rDNA高通量测序研究不同品种和不同性别实验用猫肠道菌群的变化特征.方法 选取实验用猫 21 只,根据实验用猫的品种和性别进行分组,按品种分组(普通组= 12 只、品种组=9 只),按性别分组(雄性组=9 只、雌性组=12 只).采取猫的粪便样本,提取 DNA,PCR 扩增,利用通过 16S rDNA 高通量测序进行菌群结构及多样性的差异分析.结果 实验用猫门水平的优势菌为厚壁菌门、拟杆菌门、放线菌门(相对丰度之和大于96%).属水平相对丰度水平较高的菌群为链球菌属、肠球菌属、欧鲁森氏菌属、普雷沃氏菌属、双歧杆菌属和柯林斯菌属.性别可对实验用猫肠道菌群的构成产生影响,且雄性猫和雌性猫之间存在丰度有统计学差异的菌种.相较于雌性猫,普雷沃氏菌属、柔嫩梭菌属和土孢杆菌属在雄性猫的肠道中的相对丰度增加(t 检验,P<0.05).结论 利用 16S rDNA高通量测序分析了实验用猫的肠道菌群的组成、丰度等基本特点,并阐述了性别及品种对实验用猫肠道菌群物种组成的影响.

Abstract

Objective To study the variation characteristics of gut microbiota of laboratory cats of different breeds and sexes by high-throughput sequencing of 16 S rDNA.Method A total of 21 laboratory cats were grouped according to the breed and sex of the laboratory cats,grouped by breed(ordinary group = 12,breed group = 9),grouped by sex(male group=9,female group=12).Fecal samples of cats were taken,DNA extraction,PCR amplification,and differential analysis of bacterial community structure and diversity by high-throughput sequencing of 16S rDNA.Result The dominant bacteria at the phylum in the experiment were Firmicutes,Bacteroides,and Actinobacteria(the sum of the relative abundances was more than 96%).The relatively abundant flora at the genus are Streptococcus、Enterococcus、Olsenella、Prevotella_9、Bifidobacterium and Collinsella.Sex can have an effect on the composition of the gut microbiota of laboratory cats,and there are statistically different abundances between male and female cats.Compared with female cats,Prevotella_9,Faecalibacterium and Terrisporobacter increased in the intestines of male cats(t test,P<0.05).Conclusion The basic characteristics of composition and abundance of the gut microbiota of laboratory cats are analyzed by 16S rDNA high-throughput sequencing,and the effects of sex and breed on the species composition of the gut microbiota of laboratory cats are described.

关键词

16S/rDNA高通量测序/肠道菌群/实验用猫

Key words

16S high-throughput sequencing/gut microbiota/laboratory cat

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出版年

2024
实验动物科学
北京实验动物研究中心 北京实验动物学学会 北京实验动物管理办公室

实验动物科学

CSTPCD
影响因子:0.603
ISSN:1006-6179
参考文献量14
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