首页|基于网络药理学和分子对接技术探究保金立甦汤治疗脓毒症急性肺损伤的治疗机制

基于网络药理学和分子对接技术探究保金立甦汤治疗脓毒症急性肺损伤的治疗机制

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目的 基于网络药理学、分子对接技术,探究保金立甦汤(BJLS)治疗脓毒症急性肺损伤(Acute Lung Injury,ALI)的药效成分及治疗机制。方法 利用相关权威数据库(TCMSP、TCMID)并结合ADME参数筛选BJLS药效成分,并通过PuB-chem、SwissTargetPrediction等数据库预测药效成分靶点;通过OMIM、DrugBank、GeneCards、PharmGkb、TTD等数据库检索疾病靶点。成分靶点与疾病靶点取交集后得到BJLS治疗疾病的潜在靶点。通过Cytoscape软件进行"药物-成分-靶点"网络构建及分析,利用STRING数据库、Cytoscape软件绘制PPI网络图及进行网络拓扑学分析,通过R语言进行GO和KEGG分析预测BJLS治疗脓毒症ALI信号通路,根据Degree值选取排名前6的关键药效成分和关键靶点进行对接。结果 筛选共得到BJLS中56个药效成分,脓毒症ALI的相关疾病靶点3878个。药物-疾病交集得到潜在靶点440个,PPI网络拓扑学分析得到关键靶点38个。KEGG分析表明,其中与脓毒症ALI密切相关的有PI3K-AKT、NF-κB、MAPK、TNF、Toll、TLR、JAK-STAT等信号通路。GO分析发现潜在靶点与炎症反应、免疫调节和抗氧化应激等密切相关。建立的"药物-成分-靶点"体现了 BJLS多成分、多靶点、多通路的协同作用机制。分子对接结果显示选取的靶点和成分均有较好结合活性,其中玄旦素-MAPK3结合活性最好。结论 BJLS具有多组分、多靶点、多途径的协同作用特点,可通过其中的药效成分作用与相关靶点和通路参与抑制炎症反应、调节免疫应答、抗病原微生物、抗氧化应激、抑制细胞凋亡、维持细胞内皮完整性等发挥对脓毒症ALI的治疗作用。
To explore the therapeutic mechanism of Baojin Lisu Decoction in the treatment of sepsis-in-duced acute lung injury based on network pharmacology and molecular docking technology
Objective Based on network pharmacology and molecular docking technology,to explore the effective components and thera-peutic mechanism of Baojin Lisu Decoction(BJLS)in the treatment of sepsis-induced acute lung injury(ALI).Methods(1).Based on network pharmacology,the effective components of BJLS and the key targets and signaling pathways for the treatment of sepsis-induced ALI were predicted.The effective components of BJLS were screened by using the authoritative databases of traditional Chi-nese medicine(TCMSP,TCMID)and ADME parameters.The targets of effective components were predicted by PuBchem and Swis-sTargetPrediction databases,and the related disease targets of sepsis-induced ALI were retrieved by OMIM,DrugBank,GeneCards,PharmGkb and TTD databases.After the intersection of component targets and disease targets,the potential targets for the treatment of diseases were obtained.The predicted pharmacodynamic components and the potential targets obtained after intersection were used to con-struct and analyze the'drug-component-target'network by Cytoscape software,and the top 6 key pharmacodynamic components were selected according to Degree.Gene ontology(GO)analysis and genome encyclopedia(KEGG)pathway annotation analysis were per-formed on potential targets after R language operation to predict the treatment of sepsis ALI signaling pathway.(2).Based on molecular docking technology to predict the binding ability of main pharmacodynamic components and main key targets:The main pharmacodyna-mic components of the top 6 in the'Drug-Component-Target'network diagram Degree were selected to dock with the main 6 key tar-gets in the PPI network.Results(1)56 active components were screened from BJLS.The key active components were kaempferol,reni-form senecionine,pectin,scrophularin,stemonine,naringenin and so on.(2)There were 3878 disease targets related to sepsis ALI,440 drug-disease intersection targets,and 38 key targets.The main key targets were STAT3,SRC,HSP90AA1,AKT1,PTPN11,MAPK3,etc.(3)Through KEGG analysis and screening of potential targets,PI3K-AKT,NF-κB,MAPK,TNF,Toll,TLR,JAK-STAT and other signaling pathways are closely related to sepsis ALI.(4)The results of molecular docking showed that the main key tar-gets and main active ingredients had good binding activity,among which the correlation between Xuandansu-MAPK3 binding activity was the best.Gene function and signaling pathway analysis showed that these targets were involved in biological processes such as re-sponse to bacterial-derived molecules,cell response to chemical stress,response to lipopolysaccharide,positive regulation of external stimulus response,response to xenobiotic stimulation,positive regulation of MAPK cascade,positive regulation of kinase activity,etc.,and were involved in multiple inflammatory response pathways,multiple signaling pathways involving immune regulation and anti-oxida-tive stress.The established'drug-component-target'co-expression network reflects the synergistic mechanism of BJLS multi-com-ponent,multi-target and multi-pathway.Conclusion BJLS has the characteristics of multi-component,multi-target and multi-channel synergy.It can play a therapeutic role in sepsis ALI by inhibiting inflammatory response,regulating immune response,resisting pathogenic microorganisms,resisting oxidative stress,inhibiting apoptosis and maintaining cell endothelial integrity through the action of pharmacodynamic components and related targets and pathways.

Sepsis acute lung injuryBaojin Lisu DecoctionNetwork pharmacologyMolecular docking technologyTreatment mechanismMedicinal ingredients

韩立鹏、李兰、黄瑞峰、周霞辉

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贵州中医药大学,贵州贵阳 550001

贵州中医药大学第一附属医院,贵州贵阳 550001

脓毒症急性肺损伤 保金立甦汤 网络药理学 分子对接技术 治疗机制 药效成分

2024

时珍国医国药
时珍国医国药杂志社

时珍国医国药

北大核心
影响因子:0.887
ISSN:1008-0805
年,卷(期):2024.35(10)