首页|斑马鱼角蛋白8基因克隆、组织分布及时空表达分析

斑马鱼角蛋白8基因克隆、组织分布及时空表达分析

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研究旨在分析斑马鱼(Danio rerio)角蛋白 8(Keratin 8,Krt8)基因的分子特性,组织分布及病原菌感染后的动态表达模式.通过克隆斑马鱼Krt8基因CDS序列,进行生物信息学分析.利用实时荧光定量PCR技术,研究Krt8基因在健康斑马鱼肠道、肝脏、肾脏和皮肤组织中的表达分布,并分析了海藻希瓦氏菌(Shewanella algae)感染后,在各组织中的时空表达模式.研究结果显示,斑马鱼Krt8基因CDS区序列编码一个含 520 个氨基酸的蛋白质,其分子量为 57.76 kDa,且具有 14 个磷酸化位点.对构建的系统发育进化树分析表明,斑马鱼Krt8 的氨基酸序列与安水金线鲃(Sinocyclocheilus anshuiensis)的亲缘关系最近.此外,Krt8基因在斑马鱼肠道、肝脏、肾脏和皮肤组织中均有分布,其中在肝脏中的表达水平最高.海藻希瓦氏菌感染后,Krt8基因在斑马鱼检测组织中呈现差异表达,其中在肠道中表达下调,在肝脏和肾脏组织中呈现先升高再下降的趋势.综上所述,斑马鱼 Krt8 可能参与海藻希瓦氏菌感染引起的机体免疫应答或病理生理过程,为进一步研究Krt8 蛋白的功能和作用机理提供参考资料.
Cloning,tissue distribution,and spatiotemporal expression analysis of the Keratin 8 gene in Zebrafish(Danio rerio)
To analyze the molecular characteristics,tissue distribution,and dynamic expression patterns post-pathogen infection of Keratin 8(Krt8)gene in zebrafish(Danio rerio),this study cloned the coding sequence(CDS)of the zebrafish Krt8 and conducted a bioinformatics analysis.The expression distribution of the Krt8 gene in the intestine,liver,kidney,and skin tissues of healthy zebrafish was examined using real-time quantitative PCR,and its spatiotemporal expression pattern following infection with Shewanella algae was analyzed.The results showed that the CDS of the zebrafish Krt8 gene encoded a protein consisting of 520 amino acids with a molecular weight of 57.76 kDa,featuring 14 phosphorylation sites.Phylogenetic tree analysis indicated a close evolutionary relationship between the amino acid sequence of zebrafish Krt8 and that of Sinocyclocheilus anshuiensis.Furthermore,the Krt8 gene was expressed in the intestine,liver,kidney,and skin tissues of zebrafish,with the highest expression level observed in the liver.Following infection with S.algae,differential expression patterns of Krt8 were noted in the tested tissues,with a downregulation in the intestine and an initial increase followed by a decrease in the liver and kidney.In summary,the findings of this study suggest that Krt8 in zebrafish may play a role in the organism's immune response or pathophysiological processes induced by S.algae infection.These insights provide a valuable reference for further investigations into the functional mechanisms and roles of Krt8 protein.

Keratin 8zebrafishbioinformatics analysistissue distributionspatiotemporal expression

路瑶、韩卓然、孙敬锋

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天津农学院水产学院 天津市水产生态及重点实验室 天津 300392

天津农学院,农业农村部智慧养殖重点实验室(省部共建),天津 300392

角蛋白8 斑马鱼 生物信息学分析 组织分布 时空表达

天津市自然科学基金农业农村部智慧养殖重点实验室(省部共建)开放基金项目天津市海水养殖产业技术体系天津市教委科研项目

23JCQNJC004902023-TJAULABF-2105ITTMRS20210072021KJ112

2024

天津农学院学报
天津农学院

天津农学院学报

影响因子:0.612
ISSN:1008-5394
年,卷(期):2024.31(5)