首页|基于网络药理学与分子对接分析莲子治疗慢性肠炎的作用机制

基于网络药理学与分子对接分析莲子治疗慢性肠炎的作用机制

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目的 采用网络药理学与分子对接的方法,分析莲子治疗慢性肠炎的作用机制.方法 从BATMAN-TCM、TCMSP数据库中筛选莲子的有效成分及作用靶点,从GeneCards、Drugbank数据库中获取慢性肠炎的潜在靶点,取二者的交集作为研究对象,在Cytoscape中构建莲子与慢性肠炎的互作网络.使用STRING数据库构建PPI网络和MCODE模块,并使用DAVID数据库和Metas-cape 数据库进行GO富集分析和KEGG富集分析.通过AutoDuck vina及PyMOL软件对靶基因和对应的活性化合物进行分子对接和可视化分析.结果 莲子中关键有效成分与慢性肠炎的交集靶点一共58个,通过GO富集分析显示,这些基因主要富集在肠道电压门控钠离子通道与神经突触后膜,并参与了突触后膜电位的调节和钠离子跨膜转运的生物过程.KEGG富集分析显示,交集靶点富集的最主要的通路是肠神经活性配体-受体通路.分子对接结果显示,靶基因和对应的活性化合物具有较好的结合活性.结论 莲子通过升高肠道乙酰胆碱酯酶活性、调节肠道5-羟色胺水平、抑制胆碱能受体在肠道中的表达,主要通过肠道电压门控钠离子信号通路和肠神经活性配体-受体通路发挥对慢性肠炎的治疗作用.
Study on the mechanism of nelumbinis semen in the treatment of chronic enteritis based on network pharmacology and molecular docking
Objective To explore the mechanism of nelumbinis semen treatment for chronic enteritis by using net-work pharmacology and molecular docking.Methods The targets of nelumbinis semen were screened from BATMAN-TCM databases and TCMSP databases.The potential targets of chronic enteritis were obtained from GeneCards and Drugbank databases.The intersection of the two targets was taken as the research object.The construction of the interaction net-work between nelumbinis semen and chronic enteritis was constructed in Cytoscape.The PPI network and MCODE mod-ule were constructed through STRING database.GO enrichment analysis and KEGG enrichment analysis were performed by DAVID database and Metascape database.The target genes and corresponding active compounds were docked and visually analyzed by AutoDuck vina and PyMOL software.Results The main ingredients were selected from nelumbinis semen,which included 58 intersected targets related to chronic enteritis.The GO enrichment analysis showed that these genes were mainly enriched in voltage-gated sodium channels and postsynaptic membranes,and were involved in the bio-logical process of regulation of postsynaptic membrane potential and sodium ion transmembrane transport.KEGG enrich-ment analysis showed that the neuroactive ligand-receptor pathway was the most significant pathway enriched by inter-section targets.The results of molecular docking showed that the target genes and the corresponding active compounds had good binding affinity.Conclusion Nelumbinis semen exerted a therapeutic effect on chronic enteritis mainly by in-creasing the activity of acetylcholinesterase,regulating the level of 5-hydroxytryptamine,inhibiting the expression of cho-linergic receptors in the intestine,acting on the intestinal voltage-gated sodium ion signaling pathway and neuroactive ligand-receptor pathway.

Nelumbinis semenChronic enteritisNetwork pharmacologyMolecular docking

陈振辉、周妍、严大鹏、叶岩荣、裘齐宁

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复旦大学附属中山医院厦门医院药剂科,福建厦门 361015

复旦大学附属中山医院药剂科

莲子 慢性肠炎 网络药理学 分子对接

2024

胃肠病学和肝病学杂志
郑州大学

胃肠病学和肝病学杂志

CSTPCD
影响因子:1.029
ISSN:1006-5709
年,卷(期):2024.33(3)
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