首页|基于两样本孟德尔随机化研究分析肠道菌群与再生障碍性贫血之间的因果关系

基于两样本孟德尔随机化研究分析肠道菌群与再生障碍性贫血之间的因果关系

Causal relationship between gut microbiota and aplastic anemia based on a two-sample Mendelian randomization study

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目的 本研究旨在利用两样本孟德尔随机化(Mendelian randomization,MR)方法探索肠道菌群与再生障碍性贫血(aplastic anemia,AA)之间的因果关系.方法 肠道菌群遗传数据全基因组关联统计学显著性意义水平设置为P<1×10-5以及r2=0.001和clumping 距离=10 000 kb以消除连锁不平衡(linkage disequilibrium,LD).剩余的强相关联且独立的单核苷酸多态性(single nucleotide polymorphisms,SNP)作为遗传工具变量(instrumental variants,IV)用于MR分析.敏感性分析包括MR-PRESSO global检验、MR-Egger intercept检验、Cochran's Q 检验和留一法.结果 总共8种肠道微生物群包含109个SNP被纳入研究.结果 显示包括Bacteroidetes门、Bacteroidia纲、Bacteroidales目、Anaerotruncus属、Eubacterium hallii group属、Family XIII UCG001属和Intestinibacter属均与AA发病风险呈正相关(ORIVW=1.343,95%CI 1.030~1.752,PIVW=0.029;ORIVW=1.386,95%CI 1.094~1.757,PIVW=0.007;ORIVW=1.386,95%CI 1.094~1.757,PIVW=0.007;ORIVW=1.365,95%CI 1.036~1.799,PIVW=0.027;ORIVW=1.224,95%CI 1.008~1.488,PIVW=0.042;ORIVW=1.399,95%CI 1.085~1.804,PIVW=0.010;ORIVW=1.244,95%CI 1.034~1.497,PIVW=0.021).相反,Parasutterella属与AA发病风险呈负相关(ORIVW=0.835,95%CI 0.703-0.992,PIVW=0.041).逆向MR没有观察到AA对肠道菌群存在因果效应.结论 两样本MR方法证实肠道菌群对AA存在潜在的因果作用,两者之间的因果联系的具体机制有待进一步探索.
Objective This study aimed to explore the causal relationship between gut microbiota and aplastic anemia(AA)using a two-sample Mendelian randomization(MR)approach.Methods The genome-wide association significance level of the gut microbiota genetic data was set at P<1×10-5 and r2=0.001 and clumping distance=10 000 kb to eliminate linkage disequilibrium(LD).The remaining strong and independent single nucleotide polymorphisms(SNP)were used as genetic instrumental variants(IV)for MR analysis.The sensitivity analyses included the MR-PRESSO global test,the MR-Egger intercept test,the Cochran's Q test was and the leave-one-out method.Results A total of eight gut microbiota species with 109 SNP were included in the study.The results showed that phylum Bacteroidetes,class Bacteroidia,order Bacteroidales,genus Anaerotruncus,genus Eubacterium hallii group,genus Family XIII UCG001 and genus Intestinibacter were positively correlated with AA risk(ORIVW=1.343,95%CI 1.030~1.752,PIVW=0.029;ORIVW=1.386,95%CI 1.094~1.757,PIVW=0.007;ORIVW=1.386,95%CI 1.094~1.757,PIVW=0.007;ORIVW=1.365,95%CI 1.036~1.799,PIVW=0.027;ORIVW=1.224,95%CI 1.008~1.488,PIVW=0.042;ORIVW=1.399,95%CI 1.085~1.804,PIVW=0.010;ORIVW=1.244,95%CI 1.034~1.497,PIVW=0.021).In contrast,genus Parasutterella was negatively associated with the risk of AA(ORIVW=0.835,95%CI 0.703~0.992,PIVW=0.041).Reverse MR study did not observe a causal effect of AA on gut microbiota.Conclusion Two-sample MR method confirmed the potential causal role of gut microbiota in AA.The underlying mechanism of the causal link between the two needs to be further explored in further studies.

Gut microbiotaAplastic anemiaMendelian randomizationSingle nucleotide polymorphismsGenetic instrumental variants

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江南大学附属医院胸腹部放疗科,江苏 无锡 214000

肠道菌群 再生障碍性贫血 孟德尔随机化 单核苷酸多态性 遗传工具变量

2024

延安大学学报(医学科学版)
延安大学

延安大学学报(医学科学版)

影响因子:0.551
ISSN:1672-2639
年,卷(期):2024.22(3)