遗传学报2024,Vol.51Issue(5) :479-491.DOI:10.1016/j.jgg.2024.01.002

Genome engineering of the human gut microbiome

Linggang Zheng Juntao Shen Ruiyue Chen Yucan Hu Wei Zhao Elaine Lai-Han Leung Lei Dai
遗传学报2024,Vol.51Issue(5) :479-491.DOI:10.1016/j.jgg.2024.01.002

Genome engineering of the human gut microbiome

Linggang Zheng 1Juntao Shen 2Ruiyue Chen 3Yucan Hu 3Wei Zhao 2Elaine Lai-Han Leung 4Lei Dai3
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作者信息

  • 1. Dr Neher's Biophysics Laboratory for Innovative Drug Discovery/State Key Laboratory of Quality Research in Chinese Medicine,Macau University of Science and Technology,Taipa,Macau 999078,China;CAS Key Laboratory of Quantitative Engineering Biology,Shenzhen Institute of Synthetic Biology,Shenzhen Institutes of Advanced Technology,Chinese Academy of Sciences,Shenzhen 518055,China
  • 2. CAS Key Laboratory of Quantitative Engineering Biology,Shenzhen Institute of Synthetic Biology,Shenzhen Institutes of Advanced Technology,Chinese Academy of Sciences,Shenzhen 518055,China
  • 3. CAS Key Laboratory of Quantitative Engineering Biology,Shenzhen Institute of Synthetic Biology,Shenzhen Institutes of Advanced Technology,Chinese Academy of Sciences,Shenzhen 518055,China;University of Chinese Academy of Sciences,Beijing 100049,China
  • 4. Cancer Center,Faculty of Health Science,University of Macau,Macau 999078,China;MOE Frontiers Science Center for Precision Oncology,University of Macau,Macau 999078,China
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Abstract

The human gut microbiome,a complex ecosystem,significantly influences host health,impacting crucial aspects such as metabolism and immunity.To enhance our comprehension and control of the molecular mechanisms orchestrating the intricate interplay between gut commensal bacteria and human health,the exploration of genome engineering for gut microbes is a promising frontier.Nevertheless,the complexities and diversities inherent in the gut microbiome pose substantial challenges to the development of effective genome engineering tools for human gut microbes.In this comprehensive review,we provide an overview of the current progress and challenges in genome engineering of human gut commensal bacteria,whether executed in vitro or in situ.A specific focus is directed towards the advancements and prospects in cargo DNA delivery and high-throughput techniques.Additionally,we elucidate the immense potential of genome engineering methods to enhance our understanding of the human gut microbiome and engineer the mi-croorganisms to enhance human health.

Key words

Non-model gut commensals/Genome editing reagents/Cargo delivery/High-throughput genome engineering

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基金项目

国家重点研发计划(2019YFA0906700)

Guangdong Basic and Applied Basic Research Foundation(2020A1515110184)

Dr.Neher's Biophysics Laboratory for Innovative Drug Discovery(001/2020/ALC)

regular grants from Macao Science and Technology Development Fund(0056/2020/AMJ & 0063/2022/A2)

Young Qihuang Scholar funded by National Administration of Traditional Chinese Medicine(2020)()

Startup Research Grant of University of Macau(SRG2022-00020-FHS)

Faculty of Health Sciences,University of Macau()

出版年

2024
遗传学报
中国遗传学会 中国科学院遗传与发育生物学研究所

遗传学报

CSTPCDCSCD
影响因子:0.821
ISSN:1673-8527
参考文献量149
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