遗传学报2024,Vol.51Issue(11) :1228-1236.DOI:10.1016/j.jgg.2024.06.018

Population-scale variability of the human UDP-glycosyltransferase gene family

Daianna González-Padilla Mahamadou D.Camara Volker M.Lauschke Yitian Zhou
遗传学报2024,Vol.51Issue(11) :1228-1236.DOI:10.1016/j.jgg.2024.06.018

Population-scale variability of the human UDP-glycosyltransferase gene family

Daianna González-Padilla 1Mahamadou D.Camara 2Volker M.Lauschke 3Yitian Zhou2
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作者信息

  • 1. Department of Physiology and Pharmacology,Karolinska Institutet,Stockholm,Sweden
  • 2. Department of Physiology and Pharmacology,Karolinska Institutet,Stockholm,Sweden;Center for Molecular Medicine,Karolinska Institutet and University Hospital,Stockholm,Sweden
  • 3. Department of Physiology and Pharmacology,Karolinska Institutet,Stockholm,Sweden;Center for Molecular Medicine,Karolinska Institutet and University Hospital,Stockholm,Sweden;Dr Margarete Fischer-Bosch Institute of Clinical Pharmacology,Stuttgart,Germany;University of Tubingen,Tübingen,Germany
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Abstract

Human UDP-glycosyltransferases(UGTs)are responsible for the glycosylation of a wide variety of endogenous substrates and commonly prescribed drugs.Different genetic polymorphisms in UGT genes are implicated in interindividual differences in drug response and cancer risk.However,the genetic complexity beyond these variants has not been comprehensively assessed.We here leveraged whole-exome and whole-genome sequencing data from 141,456 unrelated individuals across 7 major human populations to provide a comprehensive profile of genetic variability across the human UGT gene family.Overall,9666 exonic variants were observed,of which 98.9%were rare.To interpret the functional impact of UGT missense variants,we developed a gene family-specific variant effect predictor.This algorithm identified a total of 1208 deleterious variants,most of which were found in African and South Asian pop-ulations.Structural analysis corroborated the predicted effects for multiple variations in substrate binding sites.Combined,our analyses provide a systematic overview of UGT variability,which can yield insights into interindividual differences in phase 2 metabolism and facilitate the translation of sequencing data into personalized predictions of UGT substrate disposition.

Key words

UDP-Glycosyltransferases/Genetic variants/Populations/Drug response/Cancer risk/Pharmacogenomics

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出版年

2024
遗传学报
中国遗传学会 中国科学院遗传与发育生物学研究所

遗传学报

CSTPCD
影响因子:0.821
ISSN:1673-8527
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