首页|基于生物信息学分析TSPAN9在宫颈鳞状细胞癌中的表达和预后意义

基于生物信息学分析TSPAN9在宫颈鳞状细胞癌中的表达和预后意义

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目的 通过生物信息学方法,基于TCGA数据和多种在线数据库分析TSPAN9在宫颈鳞状细胞癌(CESC)中的表达和预后意义.方法 应用UCSC数据库中下载的肿瘤数据集和TIMER 2.0数据库分别分析TSPAN9在泛癌中的表达情况;使用UALCAN数据库、HPA数据库和Kaplan-Meier Plotter数据库分析TSPAN9在CESC中的表达和预后情况;运用R语言分析TSPAN9与免疫检查点、免疫微环境、免疫浸润细胞的相关性,并进行TSPAN9在CESC中的富集分析.结果 TSPAN9在多种癌症中异常表达,其中在CESC中低表达,与CESC患者的预后密切相关.TSPAN9在CESC中与45个免疫激活剂、免疫抑制剂的标记基因相关,与CD4 T细胞、中性粒细胞、巨噬细胞、树突状细胞浸润显著相关.GO富集分析显示在CESC中TSPAN9参与了上皮-间质转化、WNT的细胞信号转导等生物过程;KEGG通路富集分析显示在CESC中TSPAN9在TGF-p信号通路、P53信号通路等发挥作用.结论 TSPAN9在CESC中的低表达对于CESC患者的预后具有临床意义,有望成为肿瘤免疫治疗的新靶点.
Expression and prognostic significance of TSPAN9 in cervical squamous cell carcinoma:A bioinformatics analysis
Objective To analyze the expression and prognostic significance of TSPAN9 in cervical squa-mous cell carcinoma(CESC)through bioinformatics analysis based on The Cancer Genome Atlas(TCGA,TIMER 2.0,UALCAN)data and multiple online databases.Methods The cancer data set downloaded from UCSC database and TIMER 2.0 database were utilized to analyze the expression of TSPAN9 in pan-cancer.The expression and prognosis of TSPAN9 in CESC were analyzed using The UALCAN database,Human Protein Atlas(HPA)database,and Kaplan-Meier Plotter database.R software was used to analyze the correlation be-tween TSPAN9 and immune checkpoints,immune microenvironment and immune-infiltrating cells,as well as the enrichment of TSPAN9 in CESC were conducted using R software.Results TSPAN9 exhibited dysregu-lated expression across multiple cancer types,with notably low expression in CESC,which was closely related to the prognosis of CESC patients.TSPAN9 expression was associated with 45 marker genes of immunostimu-lantsand immunosuppressants,as well as significantly correlated with the infiltration of CD4+T cells,neutro-phils,macrophages,and dendritic cells in CESC.Gene Ontology(GO)enrichment analysis revealed that TS-PAN9 is involved in biological processes such as epithelial-mesenchymal transition and Wnt signal transduc-tion.Kyoto Encyclopedia of Genes and Genomes(KEGG)pathway enrichment analysis showed that TSPAN9 played a role in the TGF-β signaling pathway,p53 signaling pathway and other pathways in CESC.Conclusion The low expression of TSPAN9 in CESC has clinical significance for the prognosis of CESC patients,sugges-ting its potential as a novel target for cancer immunotherapy.

tetraspanin 9uterine cervical neoplasmsbioinformaticsimmunity

张容铖、张添淼、张钟祺、向未来、郭雪峰、朱小年、陈卓、谭盛葵

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桂林医学院公共卫生学院,广西 桂林 541004

湖南省岳阳妇幼保健院,湖南 岳阳 414000

右江民族医学院,广西 百色 533000

TSPAN9 宫颈肿瘤 生物信息学 免疫

广西基础医学协同创新研究生联合培养基地技术开发项目

2021JCJD03

2024

右江民族医学院学报
右江民族医学院

右江民族医学院学报

影响因子:0.708
ISSN:1001-5817
年,卷(期):2024.46(2)
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