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柑橘黄龙病PCR检测技术优化

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为提高Jagoueix等建立的柑橘黄龙病PCR检测体系的检测效率和检出率,本研究对基因组DNA提取、PCR体系和PCR程序进行优化,分析了不同萃取次数、裂解温度和抗氧剂组合对总DNA质量的影响,并设置不同引物浓度梯度和退火温度梯度,研究其对检测效果的影响.结果表明,萃取次数对DNA质量基本无影响;水浴 65℃裂解比常温裂解提取的DNA质量更优,但总体差别不大;DNA提取液中添加β-巯基乙醇、β-巯基乙醇和PVP或者二者均不加入,对最终的基因组DNA的质量和纯度影响不大;引物浓度为 0.4~1.0 μmol/L出现稳定特征条带,引物浓度为 0.1 μmol/L时仍会产生引物二聚体;在 66.5℃退火温度下的检测结果最优.因此,采取一次萃取、常温裂解、不添加抗氧化剂可简化DNA提取步骤;将引物浓度调整为 0.8 μmol/L效果最佳;退火温度 66.5℃可提高检出率;优化后检测体系操作简便、稳定性好、检测率高,适于柑橘黄龙病的批量检测.
Optimization of PCR Detection Technology for Citrus Huanglongbing
In order to improve the efficiency and detection rate of citrus Huanglongbing detection system,the author combined the amplification system established by Jagoueix et al.to optimize DNA extraction,PCR system,and PCR program.This study used different extraction times,different cracking temperatures,and different combinations of antioxidants to study the impact on DNA quality,as well as by setting primer concentration gradients and annealing temperature gradients to study their impact on detection performance.The results showed that the extraction frequency had little effect on DNA quality.The quality of DNA extracted by water bath lysis at 65℃was better than that by room temperature lysis,but the overall difference was not significant.Adding to DNA extraction solution β-Mercaptoethanol β-Mercaptoethanol and PVP,both of which were not added,had little effect on the quality and purity of the final total DNA.Stable characteristic bands appeared at primer concentrations of 0.4-1.0 μmol/L,and primer dimers were still formed at primer concentrations of 0.1 μmol/L The detection results were optimal at an annealing temperature of 66.5℃.Therefore,adopting a single extraction,room temperature lysis,and no addition of antioxidants can simplify the DNA extraction process.Adjust the primer concentration to 0.8 μmol/L had the best effect.Annealing temperature of 66.5℃could improve the detection rate.The optimized detection system was easy to operate,stable,and had a high detection rate,making it suitable for batch detection of Huanglongbing.

Citrus HuanglongbingDNA extractionPCRdetection system

杨亚、石卓艺、周闰、彭丁文、朱宝德、王丽艳、孙倩楠、唐志敏、何艳晴、申超峰

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郴州市农业科学研究所,湖南 郴州 423000

郴州市柑橘黄龙病检验检测中心,湖南 郴州 423000

郴州市柑橘脱毒技术研发中心,湖南 郴州 423000

湘南学院,湖南 郴州 423000

郴州市农作物分子技术应用研发中心,湖南 郴州 423000

郴州市农业农村局,湖南 郴州 423000

郴州市柑橘黄龙病(木虱)监测与防控技术研发中心,湖南 郴州 423000

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柑橘黄龙病 DNA提取 PCR 检测体系

2024

中国果菜
中华全国供销合作总社济南果品研究院 山东省供销合作社联合社 中国果蔬贮藏加工技术研究中心

中国果菜

影响因子:0.204
ISSN:1008-1038
年,卷(期):2024.44(12)