首页|BioTreasury:a community-based repository enabling indexing and rating of bioinformatics tools

BioTreasury:a community-based repository enabling indexing and rating of bioinformatics tools

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The exponential growth of bioinformatics tools in recent years has posed challenges for scientists in selecting the most suitable one for their data analysis assignments.Therefore,to aid scientists in making informed choices,a community-based platform that indexes and rates bioinformatics tools is urgently needed.In this study,we introduce BioTreasury(http://biotreasury.rjmart.cn),an integrated community-based repository that provides an interactive platform for users and developers to share their experiences in various bioinformatics tools.BioTreasury offers a comprehensive collection of well-indexed bioinformatics software,tools,and databases,totaling over 10,000 entries.In the past two years,we have continuously improved and maintained BioTreasury,adding several exciting features,including creating structured homepages for every tool and user,a hierarchical category of bioinformatics tools and classifying tools using large language model(LLM).BioTreasury streamlines the tool submission process with intelligent auto-completion.Additionally,BioTreasury provides a wide range of social features,for example,enabling users to participate in interactive discussions,rate tools,build and share tool collections for the public.We believe BioTreasury can be a valuable resource and knowledge-sharing platform for the biomedical community.It empowers researchers to effectively discover and evaluate bioinformatics tools,fostering collaboration and advancing bioinformatics re-search.

bioinformatics tools indextool databaserating systemlarge language modeltool collections sharing

Qi Zhao、Xin Zhou、Jingxing Wu、Jieyi Cai、Xiaoqiong Bao、Lin Tang、Chaoye Wang、Chunlei Liu、Yukai Wang、Yuyan Teng、Mohan Zheng、Weiping Mu、Zhixiang Zuo、Yubin Xie、Xiaotong Luo、Jian Ren

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School of Life Sciences,State Key Laboratory of Oncology in South China,Cancer Center,Guangdong Provincial Clinical Research Center for Cancer,Sun Yat-sen University,Guangzhou 510060,China

Institute of Precision Medicine,The First Affiliated Hospital,Sun Yat-sen University,Guangzhou 510080,China

Guangdong Institute of Gastroenterology,Department of General Surgery,Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases,The Sixth Affiliated Hospital,Sun Yat-sen University,Guangzhou 510275,China

National Key Research and Development Program of ChinaNational Natural Science Foundation of ChinaNational Natural Science Foundation of ChinaYoung Elite Scientists Sponsorship Program by Guangzhou Association for Science and TechnologyYouth Talent Support Program of Guangdong Provincial Association for Science and TechnologyYoung Talents Program of Sun Yatsen University Cancer Center

2021YFA13021008217286132200542QT-202 3-045SKXRC202313YTP-SYSUCC-0033

2024

中国科学:生命科学(英文版)
中国科学院

中国科学:生命科学(英文版)

CSTPCD
影响因子:0.806
ISSN:1674-7305
年,卷(期):2024.67(2)
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