首页|Computational tools for plant genomics and breeding

Computational tools for plant genomics and breeding

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Plant genomics and crop breeding are at the intersection of biotechnology and information technology.Driven by a combination of high-throughput sequencing,molecular biology and data science,great advances have been made in omics technologies at every step along the central dogma,especially in genome assembling,genome annotation,epigenomic profiling,and transcriptome profiling.These advances further revolutionized three directions of development.One is genetic dissection of complex traits in crops,along with genomic prediction and selection.The second is comparative genomics and evolution,which open up new opportunities to depict the evolutionary constraints of biological sequences for deleterious variant discovery.The third direction is the development of deep learning approaches for the rational design of biological sequences,especially proteins,for synthetic biology.All three directions of development serve as the foundation for a new era of crop breeding where agronomic traits are enhanced by genome design.

bioinformaticsplant genomicsbreeding by design

Hai Wang、Mengjiao Chen、Xin Wei、Rui Xia、Dong Pei、Xuehui Huang、Bin Han

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State Key Laboratory of Maize Bio-breeding,Frontiers Science Center for Molecular Design Breeding,Joint International Research Laboratory of Crop Molecular Breeding,National Maize Improvement Center,College of Agronomy and Biotechnology,China Agricultural University,Beijing 100193,China

Sanya Institute of China Agricultural University,Sanya 572025,China

Hainan Yazhou Bay Seed Laboratory,Sanya 572025,China

State Key Laboratory of Tree Genetics and Breeding/Key Laboratory of Tree Breeding and Cultivation of the State Forestry and Grass-land Administration/Research Institute of Forestry,Chinese Academy of Forestry,Beijing 100091,China

Shanghai Key Laboratory of Plant Molecular Sciences,College of Life Sciences,Shanghai Normal University,Shanghai 200234,China

College of Horticulture,South China Agricultural University,Guangzhou,510640,China

National Center for Gene Research,CAS Center for Excellence in Molecular Plant Sciences,Chinese Academy of Sciences,Shanghai 200233,China

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National Key Research and Development Program of ChinaNational Natural Science Foundation of ChinaChinese Universities Scientific Fund2115 Talent Development Program of China Agricultural University

2022YFD1201100320714642023RC002

2024

中国科学:生命科学(英文版)
中国科学院

中国科学:生命科学(英文版)

CSTPCD
影响因子:0.806
ISSN:1674-7305
年,卷(期):2024.67(8)
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