中国医药工业杂志2024,Vol.55Issue(7) :973-986.DOI:10.16522/j.cnki.cjph.2024.07.011

血浆外泌体lncRNA在庆大霉素致大鼠肾损伤中的作用

The Role of Plasma Exosomal lncRNA in Gentamicin-induced Kidney Injury in Rats

郑敏慧 杨紫轩 顾梦芸 孙智敏 汤纳平
中国医药工业杂志2024,Vol.55Issue(7) :973-986.DOI:10.16522/j.cnki.cjph.2024.07.011

血浆外泌体lncRNA在庆大霉素致大鼠肾损伤中的作用

The Role of Plasma Exosomal lncRNA in Gentamicin-induced Kidney Injury in Rats

郑敏慧 1杨紫轩 1顾梦芸 1孙智敏 2汤纳平1
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作者信息

  • 1. 中国医药工业研究总院,上海 201203;上海益诺思生物技术有限公司,上海 201203
  • 2. 安徽中医药大学药学院,安徽合肥 230013;长三角药物高等研究院,长三角药学高等工程学院,江苏南通 226133
  • 折叠

摘要

药物诱导的肾毒性(DIN)是药物开发阶段常见的不良反应.传统的肾损伤血清生物标志物,如血尿素氮和血清肌酐,缺乏敏感性和特异性,需要找到更优秀的新型生物标志物.该研究通过对SD大鼠肌内注射80mg/kg硫酸庆大霉素(GEN)构建药物性肾损伤模型并对其进行全转录组测序,整合DIN血浆外泌体长链非编码RNA(lncRNA)和mRNA的表达谱.随后,通过实时荧光定量逆转录PCR(RT-qPCR)测定鉴定并验证差异表达(differentially expressed,DE)的lncRNA,利用基因本体(GO)和京都基因组百科全书(KEGG)富集分析DEmRNA的功能作用,并构建竞争性内源性RNAs(ceRNAs)共表达和调控网络.测序得到了 500个DE lncRNA和1 027个DEmRNA.经GO、KEGG分析,后者主要与信号转导和免疫系统有关.所构建的ceRNA网络包括32个上调的lncRNAs、151个下调的miRNAs和42个上调的mRNAs.RT-qPCR结果显示NONRATT021116.2和NONRATT004088.2在大鼠血液中确实呈显著上调趋势.针对以上2个lncRNA构建的lncRNA/miRNA/mRNA ceRNA网络中,let-7b-5p表现出与NONRATT021116.2的高度关联,表明它可能参与了 GEN致药物性肾损伤中炎症反应的调节.该研究利用测序技术揭示了 GEN诱发肾毒性大鼠中的DE lncRNA和DE mRNA,并对这些lncRNAs进行了进一步研究,有助于深入了解DIN的发病机制,有可能找到DIN诊断标志物和治疗靶点.

Abstract

Drug-induced nephrotoxicity(DIN)is a common adverse effect during drug development phase.However,conventional serum biomarkers of renal injury,such as blood urea nitrogen and serum creatinine,lack sensitivity and specificity.It is crucial to discover superior novel biomarkers of DIN.In this study,a DIN model was constructed by intramuscular injection of 80 mg/kg of gentamicin sulphate(GEN)in SD rats,and plasma exosomal lncRNA and mRNA expression profiles were evaluated by RNA sequencing.Differentially expressed(DE)lncRNAs were identified and validated through real-time reverse transcription quntitative PCR(RT-qPCR)assays.The functional roles of DE mRNAs were elucidated using Gene Ontology(GO)and Kyoto Encyclopedia of Genes and Genomes(KEGG)enrichment analyses.Additionally,coding/non-coding co-expression and competing endogenous RNAs(ceRNAs)network to unveil potential relationships in DIN were established.The results showed that 500 differentially expressed(DE)lncRNAs and 1 027 DE mRNAs were identified,the latter primarily associated with signal transduction and the immune system.The established ceRNAs co-expression and regulation networks comprised 32 upregulated lncRNAs,151 downregulated miRNAs,and 42 upregulated mRNAs.Through RT-qPCR,NONRATT021116.2 and NONRATT004088.2 were found notably upregulated in rat blood.Then,NONRATT021116.2/miRNA/mRNA and NONRATT004088.2/miRNA/mRNA ceRNA networks were constructed.Notably,let-7b-5p exhibited a high association with NONRATT021116.2,suggesting potential involvement in modulating inflammatory responses.This study reveals DE lncRNAs and mRNAs in DIN rats using sequencing techniques.Further exploration of these lncRNAs promises insights into the genetic mechanisms underlying DIN and may lead to the identification of diagnostic markers and therapeutic targets.

关键词

药物诱导的肾毒性/长链非编码RNA/急性肾损伤/外泌体/竞争性内源性RNA网络

Key words

drug-induced nephrotoxicity/long non-coding RNA/acute kidney injury/exosome/competing endogenous RNA network

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出版年

2024
中国医药工业杂志
上海医药工业研究院,中国化学制药工业协会

中国医药工业杂志

CSTPCDCSCD
影响因子:0.487
ISSN:1001-8255
参考文献量22
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