首页|刺梨果实不同发育时期转录组分析及RACE法克隆CNR基因

刺梨果实不同发育时期转录组分析及RACE法克隆CNR基因

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为研究刺梨果实不同发育期的差异表达基因,对不同发育期果实进行转录组测序.结果表明,共组装了 98 752个单基因,其中有64003个基因可被数据库注释.Ⅰ期vsⅡ期有上调基因1 842个,下调基因1 159个;Ⅰ期vs Ⅲ期有上调基因911个,下调基因538个.刺梨果实不同时期的基因表达差异较大,这些基因表达差异为探索刺梨果实发育机制提供参考.CNR基因即细胞数量调控因子,是一个植物的细胞数量负调控因子,可能调控果实发育.本研究利用RACE技术克隆得到一个刺梨CNR基因的cDNA全长序列,并构建真核表达载体,为后续深入研究基因功能提供基础.
Transcriptome Analysis and Cloning of CNR Gene by RACE Method of Rosa roxburghii Tratt.Fruit at Different Developmental Stages
In order to study the differentially expressed genes of Rosa roxburghii Tratt.fruits at differ-ent development stages,transcriptome sequencing was performed on the fruits at different develop-ment stages.The results showed that a total of 98 752 single genes were assembled,of which 64 003 genes could be annotated by the database.There were 1 842 up-regulated genes and 1 159 down-regu-lated genes in stage Ⅰ vs stage Ⅱ.There were 911 up-regulated genes and 538 down-regulated genes in stage Ⅰ vs stage Ⅲ.The differences in gene expression in different periods of Rosa roxburghii Tratt.fruit were big,which provided a reference for exploring the mechanism of Rosa roxburghii Tratt.fruit development.CNR gene,cell number regulator,was a negative regulator of plant cell number and could regulate fruit development.In this study,a full-length cDNA sequence of CNR gene was cloned using RACE technology,and the eukaryotic expression vector was constructed,which provided the basis for further study of gene function.

Rosa roxburghii Tratt.fruittranscriptomecell number regulator factorsgene

陈宏宇、杨烨、于莹、田媛

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贵州中医药大学药学院,贵阳 550025

贵州中医药大学基础医学院,贵阳 550025

刺梨 果实 转录组 细胞数量调控因子 基因

国家自然科学基金贵州中医药大学学术新苗项目贵州中医药大学博士启动基金

82360853贵科合学术新苗[2023]-18号[2020]19号

2024

种子
贵州省种子管理站 贵州省种子学会 中国种子协会

种子

CSTPCD北大核心
影响因子:0.502
ISSN:1001-4705
年,卷(期):2024.43(5)
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