作物学报2024,Vol.50Issue(2) :294-309.DOI:10.3724/SP.J.1006.2023.34062

BSA-Seq结合RNA-Seq技术挖掘大豆叶片提前黄化衰老基因

Mine the genes of premature yellowing and aging in soybean leaves by BSA-seq combined with RNA-seq technology

李世宽 洪慧龙 付佳祺 谷勇哲 孙如建 邱丽娟
作物学报2024,Vol.50Issue(2) :294-309.DOI:10.3724/SP.J.1006.2023.34062

BSA-Seq结合RNA-Seq技术挖掘大豆叶片提前黄化衰老基因

Mine the genes of premature yellowing and aging in soybean leaves by BSA-seq combined with RNA-seq technology

李世宽 1洪慧龙 2付佳祺 1谷勇哲 1孙如建 3邱丽娟1
扫码查看

作者信息

  • 1. 哈尔滨师范大学生命科学与技术学院,黑龙江哈尔滨 150025;中国农业科学院作物科学研究所,北京 100081
  • 2. 中国农业科学院作物科学研究所,北京 100081
  • 3. 呼伦贝尔市农业科学研究所,内蒙古扎兰屯 162650
  • 折叠

摘要

大豆产量与其生殖生长的持续时间呈正相关,延缓其开花后叶片的衰老,提高其生理功能,有利于增加植物的粒重.叶片黄化是植物衰老的显著特征之一.关于在大豆鼓粒后期叶片黄化的研究鲜见报道.本研究对鼓粒后期叶片提前黄化突变体ly和野生型ofc杂交组合进行遗传分析,结果表明,大豆鼓粒后期叶片提前黄化性状受单隐性核基因控制.通过BSA-Seq在19号染色体得到一个2.23 Mb的初定位区间,经开发标记图位克隆后将区间缩短至1.75 Mb,区间内有219个基因,再结合RNA-Seq分析,得到了区间内12个候选基因,其中有4个SNP变异基因和8个差异表达基因.本研究结果为大豆鼓粒后期叶片黄化衰老基因的克隆奠定了基础.

Abstract

The yield of soybean is positively correlated with the duration of reproductive growth,which delays the aging of leaves after flowering,enhances their physiological performance,and supports growing plants with heavier grains.Leaf yellowing is one of the distinctive features of plant aging.Studies on leaf yellowing at the late stage of soybean drum grain have rarely been re-ported.The early yellowing feature of soybean late tympanic leaves was controlled by a single recessive nuclear gene,according to the genetic analysis of the hybrid of the early yellowing mutant ly and wild-type ofc in this study.Using Molecular Marker to Map-Based Cloning,a 2.23 Mb preliminary localization interval on chromosome 19 was obtained.The interval was shortened to 1.75 Mb and contained 219 genes.When this interval was combined with RNA-Seq analysis,12 candidate genes were detected,including 4 SNP variant genes and 8 differentially expressed genes.The findings of this study provides the framework for the cloning of genes that cause aging and yellowing during the filling later period in soybean.

关键词

大豆/突变体/BSA-Seq/RNA-Seq/图位克隆

Key words

soybean/mutant/BSA-Seq/RNA-Seq/map-based cloning

引用本文复制引用

基金项目

国家自然科学基金(32172005)

出版年

2024
作物学报
中国作物学会 中国农业科学院作物科学研究所

作物学报

CSTPCD北大核心
影响因子:1.803
ISSN:0496-3490
参考文献量57
段落导航相关论文