作物学报2024,Vol.50Issue(2) :403-413.DOI:10.3724/SP.J.1006.2024.31016

小麦TabHLH112-2B基因克隆及每穗小穗数相关功能标记开发

Cloning of TabHLH112-2B gene and development of its functional marker associated with the number of spikelet per spike in wheat

范子培 李龙 史雨刚 孙黛珍 李超男 景蕊莲
作物学报2024,Vol.50Issue(2) :403-413.DOI:10.3724/SP.J.1006.2024.31016

小麦TabHLH112-2B基因克隆及每穗小穗数相关功能标记开发

Cloning of TabHLH112-2B gene and development of its functional marker associated with the number of spikelet per spike in wheat

范子培 1李龙 2史雨刚 3孙黛珍 3李超男 2景蕊莲2
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作者信息

  • 1. 山西农业大学农学院,山西太谷 030801;中国农业科学院作物科学研究所,北京 100081
  • 2. 中国农业科学院作物科学研究所,北京 100081
  • 3. 山西农业大学农学院,山西太谷 030801
  • 折叠

摘要

bHLH(basic Helix-Loop-Helix)转录因子在植物生长发育过程中发挥着重要作用.本研究克隆了小麦TabHLH112-2B,该基因由7个外显子和6个内含子构成,编码444个氨基酸,在315~364位氨基酸处具有一个典型的HLH保守结构域.组织表达模式分析表明TabHLH112-2B在小麦幼苗期、拔节期、抽穗期和开花期的各个组织中均有表达,其中在叶和根中表达量较高.顺式作用元件分析发现TabHLH112-2B启动子区含有植物激素应答、胁迫响应、与分生组织发育相关的多种顺式作用元件,qRT-PCR结果显示其表达响应ABA、IAA、MeJA等植物激素和干旱、高盐、低温、高温等胁迫处理.基因组序列多态性分析检测到启动子区域的2个SNP,分为2种单倍型.根据SNP-682开发分子标记并进行关联分析,发现该标记与干旱、高温等多种环境下的每穗小穗数显著相关,Hap-2B-2为每穗小穗数多的优异单倍型.研究结果为培育高产广适小麦新品种的分子标记辅助育种提供了优异基因资源和技术支撑.

Abstract

The bHLH(basic Helix-Loop-Helix)transcription factor plays an important role in plant growth and development.In this study,wheat gene TabHLH112-2B was cloned,which consists of seven exons and six introns,encoding 444 amino acids,and has a typical HLH conserved domain at 315-364 amino acids.The tissue expression pattern analysis showed that TabHLH112-2B was expressed in all tissues at seedling stage,jointing stage,heading stage,and flowering stages.Among them,the relative ex-pression levels in leaves and roots were higher.The cis-acting element analysis showed that the promoter region of TabHLH112-2B contained a variety of cis-acting elements related to plant hormone responses,stress responses,and meristem development.The qRT-PCR exhibited that the relative expression level of TabHLH112-2B was responsive to plant hormones(such as ABA,IAA,MeJA)and abiotic stresses(such as drought,salt,low and high temperatures).Two SNPs were detected in its pro-moter region by genomic sequence polymorphism,which were classified into two haplotypes.A molecular marker was developed based on SNP-682,and association analysis showed that the marker was significantly correlated with the number of spikelet per spike in various environments such as drought and high temperature.Hap-2B-2 was a favorable haplotype with more spikelets per spike.These results of this study provide the valuable genetic resources and technical support for molecular marker-assisted breeding of wheat varieties with high yield and wide adaptability.

关键词

小麦/TabHLH112-2B/分子标记/关联分析/每穗小穗数/优异单倍型

Key words

wheat/TabHLH112-2B/molecular marker/association analysis/the number of spikelet per spike/favorable haplotype

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基金项目

国家重点研发计划(2022YFD1200201)

现代农业产业技术体系建设专项小麦项目(CARS-03-5)

出版年

2024
作物学报
中国作物学会 中国农业科学院作物科学研究所

作物学报

CSTPCDCSCD北大核心
影响因子:1.803
ISSN:0496-3490
被引量1
参考文献量31
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