植物分类学报2024,Vol.62Issue(4) :794-808.DOI:10.1111/jse.13020

Divergence in Elymus sibiricus is related to geography and climate oscillation:A new look from pan-chloroplast genome data

Yi Xiong Yan-Li Xiong Xue-Jie Jia Jun-Ming Zhao Li-Jun Yan Li-Na Sha Lin Liu Qing-Qing Yu Xiong Lei Shi-Qie Bai Xiao Ma
植物分类学报2024,Vol.62Issue(4) :794-808.DOI:10.1111/jse.13020

Divergence in Elymus sibiricus is related to geography and climate oscillation:A new look from pan-chloroplast genome data

Yi Xiong 1Yan-Li Xiong 1Xue-Jie Jia 1Jun-Ming Zhao 1Li-Jun Yan 2Li-Na Sha 1Lin Liu 1Qing-Qing Yu 1Xiong Lei 2Shi-Qie Bai 2Xiao Ma1
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作者信息

  • 1. College of Grassland Science and Technology,Sichuan Agricultural University,Chengdu 611130,China
  • 2. Sichuan Academy of Grassland Science,Chengdu 611700,China
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Abstract

Quaternary glacial climate oscillation and geographical isolation have significantly influenced the geographic distribution pattern and lineage evolution history of species.However,understanding how these factors specifically impact the genealogical structure of dominant Gramineous species in the Qinghai-Tibet Plateau(QTP)remains a subject of investigation.Elymus sibiricus L.(Gramineae),indigenous to the QTP and widely distributed in Eurasia,exhibits remarkable environmental adaptation and phenotypic diversity,making it an ideal candidate for phylogeographic studies.Based on the analysis of 175 complete chloroplast genome sequences,our results indicated that the ancestors of E.sibiricus originated from the QTP and underwent a complex migration history.After the speciation of E.sibiricus,several geo-groups exhibited independent differentiation,showing minimal gene flow among them.The current phylogeographic patterns of E.sibiricus are a result of frequent climate alternations and the cold climate during the Quaternary glacial,as well as the presence of several geographical barriers that have restricted the gene flow among different geo-groups.Our research has revealed for the first time that E.sibiricus has a multilineage origin,and its maternal donors are not limited to a single species.Furthermore,the high quality and mapping depth of the variant file provided reliable data for analyzing the patterns based on raw sequencing data.These findings enhance our understanding of the relationship between plant differentiation and climatic and geographical factors of Eurasia.

Key words

Elymus sibiricus/Eurasia/geographical barrier/multilineage origin/phylogeography/Quaternary glaciation

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基金项目

Beijing Genomics Institute for chloroplast genome sequencing()

国家自然科学基金(32271753)

Sichuan Province regional innovation cooperation project(2022YFQ0076)

Cooperation project of provincial college,and provincial school(2023YFSY0012)

出版年

2024
植物分类学报
中国科学院植物研究所 中国植物学会

植物分类学报

CSTPCD
影响因子:0.322
ISSN:1674-4918
参考文献量3
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