植物学报(英文版)2024,Vol.66Issue(2) :228-251.DOI:10.1111/jipb.13618

Angiosperm-wide analysis of fruit and ovary evolution aided by a new nuclear phylogeny supports association of the same ovary type with both dry and fleshy fruits

Yezi Xiang Taikui Zhang Yiyong Zhao Hongjin Dong Hongyi Chen Yi Hu Chien-Hsun Huang Jun Xiang Hong Ma
植物学报(英文版)2024,Vol.66Issue(2) :228-251.DOI:10.1111/jipb.13618

Angiosperm-wide analysis of fruit and ovary evolution aided by a new nuclear phylogeny supports association of the same ovary type with both dry and fleshy fruits

Yezi Xiang 1Taikui Zhang 2Yiyong Zhao 3Hongjin Dong 4Hongyi Chen 4Yi Hu 5Chien-Hsun Huang 3Jun Xiang 4Hong Ma5
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作者信息

  • 1. State Key Laboratory of Genetic Engineering,Ministry of Education Key Laboratory of Biodiversity and Ecological Engineering,Institute of Plant Biology,Center of Evolutionary Biology,School of Life Sciences,Fudan University,Shanghai 200438,China;Department of Biology,Howard Hughes Medical Institute,Duke University,Durham,NC 27708,USA
  • 2. State Key Laboratory of Genetic Engineering,Ministry of Education Key Laboratory of Biodiversity and Ecological Engineering,Institute of Plant Biology,Center of Evolutionary Biology,School of Life Sciences,Fudan University,Shanghai 200438,China;Department of Biology,the Eberly College of Science,and the Huck Institutes of the Life Sciences,the Pennsylvania State University,University Park,PA 16802,USA
  • 3. State Key Laboratory of Genetic Engineering,Ministry of Education Key Laboratory of Biodiversity and Ecological Engineering,Institute of Plant Biology,Center of Evolutionary Biology,School of Life Sciences,Fudan University,Shanghai 200438,China
  • 4. Hubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization,College of Biology and Agricultural Resources,Huanggang Normal University,Huanggang 438000,China
  • 5. Department of Biology,the Eberly College of Science,and the Huck Institutes of the Life Sciences,the Pennsylvania State University,University Park,PA 16802,USA
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Abstract

Fruit functions in seed protection and dispersal and belongs to many dry and fleshy types,yet their evolutionary pattern remains unclear in part due to uncertainties in the phylogenetic relationships among several orders and fami-lies.Thus we used nuclear genes of 502 an-giosperm species representing 231 families to reconstruct a well supported phylogeny,with resolved relationships for orders and families with previously uncertain placements.Using this phylogeny as a framework,molecular dating supports a Triassic origin of the crown angiosperms,followed by the emergence of most orders in the Jurassic and Cretaceous and their rise to ecological dominance during the Cretaceous Terrestrial Revolution.The ro-bust phylogeny allowed an examination of the evolutionary pattern of fruit and ovary types,revealing a trend of parallel carpel fusions during early diversifications in eudicots,mon-ocots,and magnoliids.Moreover,taxa in the same order or family with the same ovary type can develop either dry or fleshy fruits with strong correlations between specific types of dry and fleshy fruits;such associations of ovary,dry and fleshy fruits define several ovary-fruit"modules"each found in multiple families.One of the frequent modules has an ovary containing multiple ovules,capsules and ber-ries,and another with an ovary having one or two ovules,achenes(or other single-seeded dry fruits)and drupes.This new perspective of re-lationships among fruit types highlights the closeness of specific dry and fleshy fruit types,such as capsule and berry,that develop from the same ovary type and belong to the same module relative to dry and fleshy fruits of other modules(such as achenes and drupes).Further analyses of gene families containing known genes for ovary and fruit de-velopment identified phylogenetic nodes with multiple gene duplications,supporting a pos-sible role of whole-genome duplications,in combination with climate changes and animal behaviors,in angiosperm fruit and ovary diversification.

Key words

angiosperm/fruit evolution/MADS-box/molecular clock/nuclear phylogeny/ovary and fruit developmental genes

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基金项目

National Natural Science Foundation of China(31670209)

National Natural Science Foundation of China(31770242)

National Natural Science Foundation of China(31970224)

China Postdoctoral Science Foundation(2019M661344)

Ministry of Education Key Laboratory of Biodiversity Science and Ecological Engineering and State Key Laboratory of Genetic ()

National Top Talent Undergraduate Training Program for outstanding undergraduates and the Wangdao Program for undergraduate ()

Eberly College of Science(Department of Biology)()

Huck Institutes for the Life Sciences at the Pennsylvania State University()

出版年

2024
植物学报(英文版)
中国植物学会

植物学报(英文版)

CSTPCDCSCD
影响因子:0.921
ISSN:1672-9072
参考文献量107
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