Design of a graphical user interface for few-shot machine learning classification of electron microscopy data
Doty, Christina 1Gallagher, Shaun 1Cui, Wenqi 1Chen, Wenya 1Bhushan, Shweta 1Oostrom, Marjolein 2Akers, Sarah 2Spurgeon, Steven R.2
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作者信息
1. Univ Washington
2. Pacific Northwest Natl Lab
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Abstract
The recent growth in data volumes produced by modern electron microscopes requires rapid, scalable, and flexible approaches to image segmentation and analysis. Few-shot machine learning, which can richly classify images from a handful of user-provided examples, is a promising route to high-throughput analysis. However, current command-line implementations of such approaches can be slow and unintuitive to use, lacking the real-time feedback necessary to perform effective classification. Here we report on the development of a Python-based graphical user interface that enables end users to easily conduct and visualize the output of few-shot learning models. This interface is lightweight and can be hosted locally or on the web, providing the opportunity to reproducibly conduct, share, and crowd-source few-shot analyses.
Key words
Transmission electron microscopy/Machine learning/Sparse data analytics/Few-shot/Segmentation/Graphical user interface/REPRODUCIBILITY/DETECTOR