首页|Optimisation of methodology for whole genome sequencing of Measles Virus directly from patient specimens

Optimisation of methodology for whole genome sequencing of Measles Virus directly from patient specimens

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? 2021In an era of decreasing genetic diversity of Measles Virus (MeV), effective surveillance requires a higher-resolution genotyping method or whole genome sequencing (WGS) to document elimination. Through optimization of MeV WGS protocol, we developed a MeV-specific probe enrichment method that allows next generation sequencing from clinical specimens. With the probe enrichment method, 70% of specimens can be sequenced at a read depth of greater than 10 reads with minimal off-target sequences.

complete genome sequenceMeasles VirusNext generation sequencingprobe enrichment

Schulz H.、Hiebert J.、Frost J.、McLachlan E.、Severini A.

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Department of Medical Microbiology and Infectious Diseases Faculty of Health Sciences University of Manitoba

2022

Journal of Virological Methods

Journal of Virological Methods

SCI
ISSN:0166-0934
年,卷(期):2022.299
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