首页|基于nrDNA ITS序列的18份宁夏枸杞资源的遗传多样性

基于nrDNA ITS序列的18份宁夏枸杞资源的遗传多样性

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[目的]利用nrDNA 1TS序列,探讨18份宁夏枸杞资源的遗传多样性.[方法]采用改进CTAB法提取枸杞叶片基因组DNA,利用合成的特异引物对其DNA中nrDNA ITS区进行扩增、克隆,对目的片段测序分析并对测序结果进行聚类分析.[结果]通过测序首次获得了18种宁夏枸杞nrDNA ITS区碱基序列,整个ITS序列长度变异范围为559~634 bp,平均为612 bp,整个转录间隔区(ITSI+ITS2)对位排列后总长度为480 bp,包括194个变异位点,占40.4%;286个保守位点,占59.6%.聚类结果表明了18份宁夏枸杞的亲缘关系与差异,并将其分为3个大类.[结论]基于nrDNA ITS区序列分析在研究枸杞种质遗传多样性方面具有一定的优越性.
Genetic Polymorphism of 18 Lycium barbarum Resources Based on nrDNA ITS Sequences
[Objective] The study aimed to investigate the genetic polymorphism of 18 Lycium barbarum resources via nrDNA ITS sequencing. [Method]The genomic DNAs from Lycium barbarum leaves were isolated by modified CTAB method for PCR amplification on the nrDNA ITS region using specifically synthesized primers; the amplified fragments were cloned and sequenced, then the sequencing results were clustered. [Result] nrDNA ITS sequences of the tested 18 Lycium barbarum were firstly obtained in the present study. For whole 18 tested materials, the variation range of whole ITS region is 559-643 bp, with an average of 612 hp; alignment analyses showed that the whole length of internal transcribed spacer (ITS1 + ITS2) was 480 bp, within which there are 194 variation sites, accounting for 40.4% , and 286 conserved sites, accounting for 59.6% , The cluster results showed that the 18 tested materials could be grouped into three classes. [Conclusion] Analysis of nrDNA ITS sequence may avail to identity the Lycium barbarum germplasm resources.

Lycium Linn.ITS sequenceDNA sequencingGenetic polymorphism

石志刚、安巍、焦恩宁、赵建华、王亚军

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宁夏农林科学院枸杞工程技术研究中心,宁夏银川,750002

枸杞属 ITS序列 遗传多样性

宁夏自然科学基金

NTB769

2008

安徽农业科学
安徽省农业科学院

安徽农业科学

CSTPCD北大核心
影响因子:0.413
ISSN:0517-6611
年,卷(期):2008.36(24)
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