According to the characteristics and existing problems in e-commerce supply chain of fresh agricultural products, the important risk of e-commerce supply chain was identified based on the literatures and expert interviews.Risk evaluation was carried out by analytic hierarchy process.Results showed that enterprise controllable risk was the greatest, which needed more attention.Moreover, cash flow risk, information flow risk and logistics risk should all be controlled.Risk control measures and solutions were put forward, aiming at providing references for rele-vant researches.