首页|胡萝卜14-3-3基因家族的鉴定与分析

胡萝卜14-3-3基因家族的鉴定与分析

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以胡萝卜为试材,采用分子生物学和生物信息学方法对胡萝卜 14-3-3基因家族各成员进行鉴定,研究分析其理化特性、基因结构、保守结构域、复制事件、系统进化及顺式作用元件,以期为进一步研究胡萝卜14-3-3蛋白的功能提供参考依据.结果表明:胡萝卜中共鉴定到11个14-3-3基因,不均匀分布在6条染色体上,含有3~7个外显子,其中1对基因发生片段复制事件;编码的蛋白序列长度为236~264 aa,分子量为26.64~30.14 kD,等电点为4.65~5.33,具有7个Motif,全部为酸性非分泌型蛋白,定位在细胞核.系统进化分析显示,胡萝卜14-3-3蛋白分为ε类(3个)与非ε(8个)类2个亚族.此外,顺式作用元件分析结果表明,胡萝卜14-3-3基因含有大量激素与逆境胁迫相关元件.
Identification and Analysis of 14-3-3 Gene Family in Daucus carota
Taking carrot as the test material,14-3-3 gene family in carrot were identified and their physicochemical properties,gene structure,conserved domains,replication events,phylogenetic evolution and cis-acting elements were analyzed,in order to provide reference for further understanding the function of 14-3-3 proteins in carrot.The results showed that a total of 11 14-3-3 genes were identified in carrot,unevenly distributed on six chromosomes,containing 3 to 7 exons,and one pair of 14-3-3 genes underwent segmental duplication.Carrot 14-3-3 proteins contained 236-264 amino acid residues,with molecular weight of 26.64-30.14 kD,isoelectric point of 5.84-9.14,and 7 conserved motifs.All 14-3-3 proteins of carrot were acidic and non-secreted proteins and located in the nucleus.Phylogenetic analysis indicated that the 14-3-3 proteins of carrot were divided into e-type(3 members)and non e-type(8 members).In addition,cis-acting element analysis showed that carrot 14-3-3 genes contained a large number of hormone-and stress-related elements.

carrot14-3-3 gene familyphylogeny analysis

王瑞雪、郭杰、郝楠、朱丽君

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兰州职业技术学院,甘肃兰州 730007

胡萝卜 14-3-3基因家族 系统进化分析

甘肃省高等学校创新基金

2022B-437

2024

北方园艺
黑龙江省农业科学院 黑龙江省园艺学会 黑龙江省农业科学院编辑出版中心

北方园艺

CSTPCD北大核心
影响因子:0.506
ISSN:1001-0009
年,卷(期):2024.(6)
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