首页|基于生物信息学方法探讨人参治疗缺血性脑卒中的作用机制

基于生物信息学方法探讨人参治疗缺血性脑卒中的作用机制

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目的:探讨人参治疗缺血性脑卒中的作用机制.方法:使用中药系统药理学数据库分析平台(TCMSP)、BATMAN-TCM数据库以及UniPort数据库获得人参有效成分以及有效成分作用靶点.通过DisGeNET基因-疾病关联数据库获得缺血性脑卒中作用的靶点;基于人参和缺血性脑卒中的共同靶点,利用Cytoscape 3.9.0 软件构建靶点共调控网络,并使用STRING数据库构建蛋白质相互作用网络图.利用 DAVID 数据库对人参与缺血性脑卒中的共同靶点进行KEGG通路富集分析和GO功能富集分析.结果:人参有效成分22 个,有效成分作用靶点293 个,缺血性脑卒中作用靶点 541 个,两者共同靶点 54 个;GO功能富集结果显示,人参治疗缺血性脑卒中的分子机制与细胞对机械刺激的反应、药物反应、脂多糖介导信号通路缺氧反应、对脂多糖反应以及对雌二醇反应等生物过程有关;KEGG通路富集结果显示,人参治疗缺血性脑卒中的机制与脂肪细胞因子信号通路、AGE-RAGE信号通路、HIF-1 信号通路以及NF-κB信号通路等有关.结论:人参治疗脑缺血的作用机制主要与AGE-RAGE信号通路、脂肪细胞因子信号、HIF-1 信号通路以及NF-κB信号通路等有关.
Study on the Mechanism of Ginseng in the Treatment of Ischemic Stroke Based on Bioinformatics Analysis
Objective:To investigate the mechanism of ginseng in the treatment of ischemic stroke.Methods:The active com-ponents of ginseng were obtained by TCMSP,BATMAN-TCM database and UniPort database.The target of ischemic stroke was ob-tained by DisGeNET gene-disease association database.Based on the common target of ginseng and ischemic stroke,the target co-regulatory network was constructed using Cytoscape 3.9.0 software,and the protein interaction network map was constructed using STRING database.KEGG pathway enrichment analysis and GO function enrichment analysis were performed for common targets in-volved in ischemic stroke using DAVID database.Results:There were 22 active components and 293 active targets of ginseng.There were 541 targets of ischemic stroke and 54 common targets of both.GO functional enrichment results showed that the molecu-lar mechanism of ginseng therapy for ischemic stroke was related to biological processes such as cell response to mechanical stimula-tion,drug response,lipopolysaccharide-mediated signal pathway hypoxia response,lipopolysaccharide response and estradiol re-sponse.The enrichment results of KEGG pathway showed that the mechanism of ginseng therapy for ischemic stroke was related to adipokine signaling pathway,AGE-RAGE signaling pathway,HIF-1 signaling pathway,and NF-κB signaling pathway.Conclu-sion:The mechanism of ginseng in the treatment of cerebral ischemia is mainly related to AGE-RAGE signaling pathway,adipokine signaling pathway,HIF-1 signaling pathway and NF-κB signaling pathway.

ginsengischemic strokebioinformatics analysis

刘艳、宁堃仙、孔令琴、侯慧欣、赵慧芳、陈海

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长治医学院药学院(山西 长治 046000)

人参 缺血性脑卒中 生物信息学分析

2024

长治医学院学报
长治医学院

长治医学院学报

影响因子:0.609
ISSN:1006-0588
年,卷(期):2024.38(6)