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马铃薯ACS基因克隆及生物信息学分析

Cloning and bioinformatic analysis of ACS gene of Potato

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1-氨基环丙烷-1-羧酸合成酶(1-aminocyclopropane-1-carboxlic acid synthetase,ACS)是乙烯合成途径中的限速酶,为明确其基因结构为目标,根据已报道的基因序列信息,用马铃薯栽培品种‘甘农薯2号’试管苗作为材料,提取叶片总 RNA,设计基因特异性引物,利用 RT-PCR 克隆出ACS基因,并对基因及其蛋白进行了生物信息学分析.结果表明:ACS基因CDS区长1461 bp,编码486个氨基酸,ACS蛋白分子量约为55 kU,PI 6.76;具有12个alpha螺旋区域,22个beta片层区,32个转角和23个自由卷曲区;具有39个疏水区和41个亲水区;同源性分析表明ACS基因在高等植物中保守性较高.
1-aminocyclopropane-1-carboxlic acid synthase (ACS)is a rate-limiting enzyme in pathway of ethylene biosynthesis.To elucidate the gene structure,RNA was extracted from leaves of the potato culti-var ‘Gannongshu 2’to design gene special primers.The target gene ACS was cloned by RT-PCR,and the target gene and protein were analyzed by bioinformatics.The results showed that CDS of ACS gene con-tained 1 461 bp nucleotides which encoded 486 amino acids with molecular weight of 55 kU,PI 6.76.ACS had 12 alpha helical regions,22 beta sheet regions,32 corners and 23 free-curl zones and had 39 hydropho-bic regions and 41 hydrophilic regions.The results from homology analysis showed that ACS highly con-served in higher plants.

potatogene cloneACC synthasebioinformatics analysis

刘英、裴瑞芳、王洁、张宁、司怀军、王蒂

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甘肃省作物遗传改良与种质创新重点实验室,甘肃省干旱生境作物学省部共建国家重点实验室培育基地,甘肃 兰州 730070

甘肃农业大学生命科学技术学院,甘肃 兰州 730070

马铃薯 基因克隆 ACC合成酶 生物信息学分析

甘肃省杰出青年基金国家自然科学基金

1308RJDA01131160298

2015

甘肃农业大学学报
甘肃农业大学

甘肃农业大学学报

CSCD北大核心
影响因子:0.612
ISSN:1003-4315
年,卷(期):2015.(1)
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