首页|基于网络药理及分子对接探讨巴戟天治疗认知功能障碍的作用机制

基于网络药理及分子对接探讨巴戟天治疗认知功能障碍的作用机制

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目的 探讨巴戟天治疗认知功能障碍(CD)的可能机制.方法 采用数据库TCMSP 及OMIM、Disgenet、GeneCards检索巴戟天的活性成分、作用靶点与 CD 靶点;取巴戟天活性成分靶点与 CD 靶点的共同靶点,予STRING数据库、Cytoscape 3.9.1 软件构建巴戟天活性成分-治疗CD共同靶点网络图、蛋白互作网络图(PPI),筛选关键化合物与关键靶点;通过生物信息注释数据库(DAVID)进行基因本体(GO)、基因组百科全书(KEGG)信号通路的富集分析,运用Cytoscape 3.9.1 软件绘制成分-靶点-通路网络图,预测关键靶点作用机制;分别从数据库Pub-chem、蛋白质结构数据库(PDB)获取活性成分、靶点蛋白结构,导入Autodock 4.2 软件进行对接验证.结果 共获巴戟天活性成分 20 个、作用靶点 283 个、CD相关基因 1904 个、巴戟天活性成分与CD疾病共同靶点 103 个、巴戟天治疗CD关键靶点 21 个,AKT1、BCL2、EGFR、CASP3、GSK3B、ESR1、HIF1A居前 7 位;GO分析显示,巴戟天治疗CD的作用机制涉及β淀粉样蛋白的细胞反应、肽基酪氨酸磷酸化、学习记忆、蛋白质磷酸化等过程;KEGG通路主要富集在癌症、内分泌、神经退行性三类疾病相关通路;靶点AKT1、BCL2、CASP3、GSK3B、HIF1A与成分大黄素-A和/或 1-羟基-3-甲氧基-9,10-蒽醌的结合能≤-5.0 Kcal/mol.结论 巴戟天治疗CD可能通过大黄素-A、1-羟基-3-甲氧基-9,10-蒽醌通过调控AKT1/GSK3B/BCL2/CASP3 通路的多个靶点发生氧化/磷酸化/凋亡级联反应而发挥作用.
Mechanisms of Morindae Officinalis Radix in Treatment of Cognitive Dysfunction Based on Network Pharmacology and Molecular Docking
Objective To analyze the potential targets and mechanism of action underlying the therapeutic action of Morindae Officinalis Radix(MOR)against cognitive dysfunction(CD).Methods The active ingredients,action targets and Crohn's disease(CD)targets of MOR were retrieved using the databases TCMSP,OMIM,Disgenet and GeneCards.The common targets of the active ingredient targets and CD targets of MOR were taken,and the STRING database and Cytoscape 3.9.1 software were used to construct the network diagram of active ingredients of MOR-common targets for treating CD and the protein-protein interaction network diagram(PPI),and to screen the key compounds and key targets.The enrichment analysis of Gene On-tology(GO)and Kyoto Encyclopedia of Genes and Genomes(KEGG)signaling pathways was carried out through the Database for Annotation,Visualization and Integrated Discovery(DA-VID),and the Cytoscape 3.9.1 software was used to draw the network diagram of ingredients-targets-pathways to predict the action mechanism of the key targets.The structures of the ac-tive ingredients and target proteins were respectively obtained from the databases Pubchem and PDB,and imported into the Autodock 4.2 software for docking verification.Results A total of 20 MOR active ingredients,283 action targets,1904 CD-related genes,103 common targets of both MOR and CD,and 21 key targets related to CD treatment were obtained.AKT1,BCL2,EG-FR,CASP3,GSK3B,ESR1,HIF1A ranked the top 7.GO analysis showed that the mechanism of action of MOR for the treatment of CD involves the cellular response of β-amyloid protein,pep-tidyl tyrosine phosphorylation,learning and memory,protein phosphorylation,etc.KEGG pathway is mainly enriched in three disease-related pathways:cancer,endocrine,and neurodegenera-tive.The binding energies of the targets AKT1,BCL2,CASP3,GSK3B,and HIF1A to the compo-nents rhodopsin-A and/or 1-hydroxy-3-methoxy-9,10-anthraquinone were≤-5.0 Kcal/mol.Conclusion The treatment of CD with MOR may exert its effect by regulating multiple targets of the AKT1/GSK3B/BCL2/CASP3 pathway through the oxidation/phosphorylation/apoptosis cas-cade reaction of rhodopsin-A,1-hydroxy-3-methoxy-9,and10-anthraquinone.

cognitive dysfunctionMORnetwork pharmacologymolecular dockingsignal pathwaytargets

何乐为、沈俏嫔、吴申强、杨麟、方春平、刘步平

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广州中医药大学第二附属医院(广东 广州 510405)

中医证候全国重点实验室(广东 广州 510405)

广州中医药大学公共卫生与管理学院(广东 广州 510405)

暨南大学中医学院(广东 广州 510405)

广州中医药大学体育健康学院(广东 广州 510405)

广州中医药大学中药学院(广东 广州 510405)

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认知功能障碍 巴戟天 网络药理学 分子对接 信号通路 靶点

2024

湖北民族大学学报(医学版)

湖北民族大学学报(医学版)

ISSN:
年,卷(期):2024.41(4)