吉林农业大学学报2024,Vol.46Issue(1) :78-85.DOI:10.13327/j.jjlau.2022.1916

西洋参氧化鲨烯环化酶基因家族的鉴定、组织表达特异性分析及PqOSC2基因的克隆

Identification and Tissue-specific Expression Analysis of Oxidosqua-lene Cyclase Gene Family and Cloning of PqOSC2 Gene in Panax quinquefolium

邸鹏 闫艳 王英平
吉林农业大学学报2024,Vol.46Issue(1) :78-85.DOI:10.13327/j.jjlau.2022.1916

西洋参氧化鲨烯环化酶基因家族的鉴定、组织表达特异性分析及PqOSC2基因的克隆

Identification and Tissue-specific Expression Analysis of Oxidosqua-lene Cyclase Gene Family and Cloning of PqOSC2 Gene in Panax quinquefolium

邸鹏 1闫艳 2王英平2
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作者信息

  • 1. 中国中医科学院博士后科研流动站,北京 100700;中国中医科学院中药资源中心道地药材国家重点实验室培育基地,北京 100700;人参新品种选育与开发国家地方联合工程研究中心,长春 130118
  • 2. 人参新品种选育与开发国家地方联合工程研究中心,长春 130118
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摘要

氧化鲨烯环化酶是催化三萜类皂苷合成的关键酶,通过全长转录组分析鉴定西洋参中氧化鲨烯环化酶,利用生物信息学方法对西洋参全装转录组数据库中OSC(氧化鲨烯环化酶)基因家族进行鉴定并对其进行蛋白基序、理化性质、表达特征分析.结果表明:从西洋参中共鉴定到15个西洋参OSC基因家族,系统发育分析将其分为7个亚族,组织特异性表达分析表明,OSC基因家族在不同部位具有4种表达模式,OSC与人参皂苷积累共表达分析表明,OSC基因家族与不同类型皂苷合成相关.试验还克隆得到与原人参三醇和人参皂苷Re合成正调控的PqOSC2基因全长序列,为进一步揭示氧化鲨烯环化酶家族在西洋参三萜皂苷合成作用机制提供依据.

Abstract

Oxidosqualene cyclase is the key enzyme that catalyzes biosynthesis of triterpenoid sapo-nins,and the identification of oxidosqualene cyclase in Panax quinquefolium is carried out by full-length transcriptome analysis,which provides a basis for the analysis of biosynthesis mechanism of triterpene saponins in P.quinquefolium.In this study,bioinformatics methods were used to identify oxidosqualene cyclase gene family in the transcriptome database of P.quinquefolium and analyze their protein motif,physicochemical properties,and expression characteristics.A total of 15 OSC genes were identified from P.quinquefolium.Phylogenetic analysis grouped them into 7 subfamilies,tissue-specific expression analysis showed that OSC gene family had four expression patterns in dif-ferent tissues,and co-expression analysis of OSC and ginsenosides accumulation showed that OSC family gene was associated with different types of saponins.The full length of PqOSC2 which was positively correlated to the accumulation of ginsenoside Re and Protopanaxatriol was also cloned.This study provides a basis for further revealing the mechanism of the oxidosqualene cyclase family in P.quinquefolium triterpene saponins biosynthesis.

关键词

西洋参/氧化鲨烯环化酶/PqOSC2基因/人参皂苷/生物信息学

Key words

Panax quinquefolium/oxidosqualene cyclase/PqOSC2 gene/ginsenoside/bioinfor-matics

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基金项目

吉林省自然科学基金项目(20210101190JC)

国家重点研发计划项目(2021YFD1600900)

吉林省重大科技专项(20200504001YY)

出版年

2024
吉林农业大学学报
吉林农业大学

吉林农业大学学报

CSTPCD北大核心
影响因子:1.014
ISSN:1000-5684
参考文献量29
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