首页|甘蓝型油菜BnWSD家族基因鉴定及其在干旱胁迫下的表达特征

甘蓝型油菜BnWSD家族基因鉴定及其在干旱胁迫下的表达特征

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干旱胁迫能诱导作物蜡酯合成酶/二酰甘油酰基转移酶基因WSD(wax synthase/diacylglycerol acyltrans-ferase)的表达.为明确甘蓝型油菜BnWSD家族基因的理化性质及其对干旱胁迫的响应特征,本研究基于甘蓝型油菜转录组数据库,利用生物信息学方法从甘蓝型油菜基因组中筛选BnWSD家族基因并对其结构、染色体定位、系统进化树及其编码蛋白质的理化性质、结构、保守基序、顺式作用元件等进行分析,并以陇油10号为试验材料,通过干旱胁迫处理明确BnWSD家族基因成员的表达特性.结果表明,甘蓝型油菜基因组中共鉴定到 36 个BnWSD家族基因,可分为3个亚家族,其编码蛋白质的氨基酸数量为105~538 个,等电点为6.32~9.63;36 个BnWSD家族基因共有 8 个保守基序,每个基因含有2~8个保守基序,motif 2是该家族共有的功能基序,在进化上较为保守;甘蓝型油菜BnWSD基因启动子区域存在11个与光响应、激素应答、干旱胁迫应答等相关的顺式作用元件.甘蓝型油菜不同器官中BnWSD基因的相对表达量存在差异,叶和茎中相对表达量较高,而根和花中的相对表达量较低或不表达.随着干旱程度加深,甘蓝型油菜叶片中BnWSD1-1、BnWSD2、BnWSD8、BnWSD9、BnWSD12、BnWSD18-1、BnWSD20-1、BnWSD24-1 等基因的相对表达量呈增加趋势.综上,BnWSD基因与甘蓝型油菜抗旱性能密切相关,本研究结果为进一步解析甘蓝型油菜抗旱机制、明确BnWSD基因家族在表皮蜡质累积中的作用及甘蓝型油菜抗旱性品种选育提供了依据.
Identification of BnWSD family genes in Brassica napus L.and their ex-pression characteristics under drought stress
Drought stress can induce the expression of crop wax synthase/diacylglycerol acyltransferase(WSD)gene.In order to clarify the physical and chemical properties of BnWSD family genes in Brassica napus and their response characteristics to drought stress,this study used bioinformat-ics methods to screen BnWSD family genes from the B.napus genome and analyzed their structure,chromosome location,phylogenetic tree and the physical and chemical properties,structure,conserved motifs and cis-acting elements of their encoding proteins,based on the B.napus transcriptome database.The expression characteristics of BnWSD family genes were de-termined by drought stress treatment with Longyou 10 as the experimental material.The results showed that a total of 36 BnWSD family genes were identified in the genome of B.napus,of which could be divided into three subfamilies.The number of amino acids of encoded proteins of 36 BnWSD family genes ranged from 105 to 538,and the isoelectric point ranged from 6.32 to 9.63.There were eight conserved motifs in 36 BnWSD family genes,and each gene contained two to eight conserved motifs,and motif 2 was a common functional motif in the BnWSD family genes,which was relatively conserved in evolution.There were 11 cis-act-ing elements related to light response,hormone response and drought stress response in the promoter region of BnWSD gene in B.napus.The relative expression levels of BnWSD gene in different organs of B.napus were different.The relative expression lev-els in leaves and stems were relatively higher,while the relative expression levels in roots and flowers were relatively lower or not expressed.With the deepening of drought,the relative expression levels of BnWSD1-1,BnWSD2,BnWSD8,BnWSD9,Bn-WSD12,BnWSD18-1,BnWSD20-1 and BnWSD24-1 in leaves of B.napus showed an increasing trend.In summary,the BnWSD gene was closely related to the drought resistance of B.napus.The results of this study provide a basis for further analysis of the drought resistance mechanism of B.napus and clarifying the role of the BnWSD gene family in epidermal wax accumulation and the breeding of drought-resistant B.napus varieties.

Brassica napusWSD gene familyidentificationdrought stress

万军斌、王旺田、孙万仓、马骊、武军艳、刘丽君、蒲媛媛、张岩、李治忠、周蓉

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甘肃农业大学生命科学技术学院/甘肃省干旱生境作物学重点实验室,甘肃 兰州 730070

甘肃省油菜工程技术研究中心,甘肃 兰州 730070

甘蓝型油菜 WSD基因家族 鉴定 干旱胁迫

甘肃省教育厅高等学校创新基金项目甘肃省科技重大专项2023年甘肃省级现代寒旱农业科技支撑项目国家油菜产业技术体系项目

2022A-05422ZD6NA009KJZC-2023-12CARS-12

2024

江苏农业学报
江苏省农业科学院

江苏农业学报

CSTPCD北大核心
影响因子:1.093
ISSN:1000-4440
年,卷(期):2024.40(7)