首页|基于网络药理学及分子对接探讨菊花抗炎的作用机制

基于网络药理学及分子对接探讨菊花抗炎的作用机制

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基于网络药理学和分子对接验证方法探讨菊花抗炎的作用机制.先从TCMSP数据库筛选 17 个菊花活性成分和109 个对应靶点,再从GeneCards、NCBI、OMIM和DisGeNET数据库筛选出 2 492 个炎症靶点;然后将菊花活性成分靶点和炎症靶点取交集得到菊花抗炎的潜在靶点;再通过构建潜在靶点PPI网络并进行拓扑分析得到菊花抗炎的核心靶点;并利用DAVID数据库对核心靶点进行GO和KEGG富集分析后,利用Cytoscape 3.9.1 软件构建"活性成分-核心靶点-通路"网络并进行拓扑分析,得到菊花抗炎的关键成分和关键靶点;最后运用AutoDock Vina对菊花抗炎的关键成分和关键靶点进行分子对接验证,根据对接结合能利用Origin软件绘制热图,分析结合能大小.结果表明,基于网络药理学,共筛选到菊花抗炎潜在靶点 56 个;再经PPI网络拓扑分析得到菊花抗炎的核心靶点 21 个;核心靶点经富集分析及"活性成分-核心靶点-通路"网络拓扑分析,最终得到菊花抗炎的 9 个关键成分和 9 个关键靶点;分子对接验证结果显示,菊花抗炎的关键活性成分和关键靶点结合良好,构象稳定.
Exploring the Anti-Inflammatory Mechanism of Chrysanthemum Based on Network Pharmacology and Molecular Docking
Based on network pharmacology and molecular docking verification methods,the anti-inflammatory mechanism of chrysanthemum was discussed.Firstly,17 active components and 109 corresponding targets of chrysanthemum were screened from TCMSP database,and then 2492 inflammatory targets were screened from GeneCards,NCBI,OMIM and DisGeNET databases.And the active component target and inflammatory target of chrysanthemum were intersected to obtain the potential anti-inflammatory target of chrysanthemum.Then,the core targets of chrysanthemum anti-inflammatory were obtained by constructing a potential target PPI network and performing topological analysis.After GO and KEGG enrichment analysis of core targets by DAVID database,the network of"active ingredient-core target-pathway"was constructed by Cytoscape3.9.1 software and topological analysis was carried out to obtain the key components and key targets of chrysanthemum anti-inflammatory.Finally,AutoDock Vina was used to verify the molecular docking of the key components and key targets of chrysanthemum anti-inflammatory.According to the docking binding energy,the heat map was drawn by Origin software,and the binding energy was analyzed.The results showed that 56 potential anti-inflammatory targets of chrysanthemum were screened based on network pharmacology.Then 21 core targets of chrysanthemum anti-inflammatory were obtained by PPI network topology analysis.The core targets were subjected to enrichment analysis and"active ingredient-core target-pathway"network topology analysis,and finally 9 key components and 9 key targets of chrysanthemum anti-inflammatory were obtained.The results of molecular docking showed that the key active components and key targets of chrysanthemum anti-inflammatory were well combined and the conformation was stable.

chrysanthemuminflammationnetwork pharmacologymolecular docking

洪梦杰、于白音、柏超凡、张朝玉、刘洁连

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河南科技职业大学 医学院,河南 周口 466000

韶关学院 广东省粤北食药资源利用与保护重点实验室,广东 韶关 512005

韶关学院 生物与农业学院,广东 韶关 512005

南雄市乡村振兴服务中心,广东 南雄 512400

广东华暨农业科技有限公司,广东 韶关 512000

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菊花 炎症 网络药理学 分子对接

河南科技职业大学校级科研项目韶关市南雄市省级南药产业园项目韶关学院重点项目

HZDKYL2023-014粤农农计[2022]6号SZ2022KJ04

2024

韶关学院学报
韶关学院

韶关学院学报

影响因子:0.28
ISSN:1007-5348
年,卷(期):2024.45(6)