首页|姜黄素治疗骨关节炎过程中潜在的铁死亡关键基因的分析与验证

姜黄素治疗骨关节炎过程中潜在的铁死亡关键基因的分析与验证

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目的 通过生物信息学手段,基于铁死亡(Ferroptosis)基因探究姜黄素治疗骨关节炎(Osteoarthritic,OA)的分子机制,为骨关节炎的诊疗和新药开发提供理论基础.方法 通过基因综合表达数据(Gene Expression Omnibus,GEO)检索,下载姜黄素治疗骨关节炎的高通量测序数据;通过主成分分析,考察姜黄素治疗前后基因表达主成分的变化;通过limma算法,考察姜黄素治疗前后转录组的变化;通过基因本体论富集算法,考察姜黄素治疗前后信号通路的改变;通过GeneMANIA在线工具,构建蛋白-蛋白相互作用网络并筛选枢纽基因;通过荧光定量PCR技术,体外验证姜黄素治疗对枢纽基因表达量的影响.结果 姜黄素治疗前后,软骨细胞的转录组表达和信号通路活性发生显著改变(P<0.05);蛋白-蛋白相互作用网络显示,GCLC、HMOX1、FTL、FTH1和SLC7A11为铁死亡枢纽基因;亚铁离子荧光探针检测和细胞内活性氧(Reactive oxygen species,ROS)检测结果显示,与对照组相比,IL-1β显著诱导炎症并提高了软骨细胞中Fe2+和ROS的累积,姜黄素治疗显著缓解了 IL-1β诱导的炎症反应,并显著降低软骨细胞中Fe2+和ROS的含量;荧光定量PCR和免疫印迹技术结果显示,姜黄素治疗显著改变了枢纽基因的表达水平(P<0.05).结论 姜黄素可能通过介导GCLC、SLC7A11基因的上调和HMOX1、FTL、FTH1基因的下调影响软骨细胞的铁死亡过程,从而对骨关节炎具有治疗作用.
Analysis and Verification of Potential Ferroptosis Key Genes in Curcumin Treatment of Osteoarthritis
Objective To explore the molecular mechanism of curcurin in the treatment of Osteoarthritic(OA)based on ferroptosis gene through bioinformatics.Methods Through Gene Expression Omnibus(GEO)retrieval,high-throughput sequencing data of curcumin in the treatment of osteoarthritis were downloaded.Principal component analysis was used to investigate the changes of principal components before and after curcumin treatment.limma algorithm was used to investigate the transcriptome changes before and after curcumin treatment.The change of signal pathway before and after curcumin treatment was investigated by gene ontology enrichment algorithm.GeneMANIA online tool was used to construct protein-protein interaction network and screen hub genes.The effect of curcumin therapy on hub gene expression was verified in vitro by fluorescence quantitative PCR.Results After curcumin treatment,the transcriptome expression and signaling pathway activity of chondrocytes were significantly changed(P<0.05).Protein-protein interaction network showed that GCLC,HMOX1,FTL,FTH1 and SLC7A11 were ferroptosis hub genes.The results of ferrous ion fluorescence probe detection and intracellular Reactive oxygen species(ROS)detection showed that IL-1βsignificantly induced inflammation and increased the accumulation of Fe2+and ROS in chondrocytes compared with the control group.Curcumin treatment significantly alleviated IL-1(3-induced inflammation.The contents of Fe2+and ROS in chondrocytes were significantly decreased.The results of quantitative PCR and western blot showed that curcumin treatment significantly changed the expression level of hub gene(P<0.05).Conclusion Curcumin may affect the ferroptosis process of chondrocytes by mediating up-regulation of GCLC and SLC7A11 genes and down-regulation of HMOX1,FTL and FTH1 genes,so as to have therapeutic effect on osteoarthritis.

OsteoarthritisFerroptosisGene expression profilePathway enrichment analysisBioinformatics

李培金、韩倩、王威、唐园、李照文

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武汉中西医结合骨科医院(武汉体育学院附属医院) 武汉 430079

骨关节炎 铁死亡 基因表达谱 通路富集分析 生物信息学

2024

世界科学技术-中医药现代化
中科院科技政策与管理科学研究所,中国高技术产业发展促进会

世界科学技术-中医药现代化

CSTPCD北大核心
影响因子:1.175
ISSN:1674-3849
年,卷(期):2024.26(9)