首页|耐硒巨大普里斯特氏菌分离鉴定及全基因组分析

耐硒巨大普里斯特氏菌分离鉴定及全基因组分析

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耐硒微生物在硒的生态系统循环中扮演重要角色,其可以通过农业-食物系统直接或者间接地将硒元素引入食物生产链中,从而影响动物和人类健康.该研究从动物的粪便中分离到一株耐硒细菌,通过16S rDNA测序和全基因组测序进行菌种鉴定,发现其为一株巨大普里斯特氏菌(Priestia megaterium),并命名为N-5.硒耐受性实验表明,N-5耐硒能力可达16 mmol/L,对硒具有较强的耐受能力.全基因组测序和分析表明,Priestia megaterium N-5基因组大小为5187490 bp,GC含量为45.61%,共编码5244个基因,基因组测序数据提交至NCBI获得GenBank登录号为JAZDWX000000000.通过AntiSMASH预测到N-5基因组中存在6种次级代谢产物生物合成相关的基因簇,包括4个未知功能的基因簇、2个相似度较高的抗生素合成基因簇(Koranimine 和 Carotenoid)和 2 个相似度仅为 23%和 13%的抗生素基因簇(Synechobactin 和 Surfactin);此外还发现了 1个细菌素编码基因簇,对应的产物为塞克肽(Sactipeptides).通过直系同源蛋白分组比对(Evolutionary genealogy of genes:non-supervised orthologous groups,eggNOG)数据库注释,发现氨基酸代谢、碳水化合物代谢是该菌株的主要代谢功能.同时,在N-5基因组中共预测到16个硒相关蛋白基因,可能与该菌株的硒耐受机制密切相关.以上研究结果可为富硒益生菌资源的开发和利用提供参考和借鉴.
Isolation,Identification and Whole-Genome Sequencing of Selenium-Tolerant Priestia megaterium
Selenium-enriched microorganisms play an important role in the selenium ecosystem cycle,and they can directly or indirectly introduce selenium into the food production chain through the agricultural-food system,thereby affecting animal and human health.In this study,a selenium-tolerant bacterium was isolated from animal feces.Species identification was performed through 16S rDNA sequencing and whole-genome sequencing,revealing it to be a strain of Priestia megaterium,named N-5.Selenium tolerance experiments showed that N-5 had a strong tolerance to selenium,with a selenium tolerance capacity of up to 16 mmol/L.Whole-genome sequencing and analysis revealed that the genome size of Priestia megaterium N-5 was 5187490 bp,with a GC content of 45.61%,encoding a total of 5244 genes.The genome sequencing data was submitted to NCBI and assigned the GenBank accession number JAZDWX000000000.Using antiSMASH,six gene clusters related to the biosynthesis of secondary metabolites were predicted in the N-5 genome,including four gene clusters with unknown functions,two highly similar antibiotic synthesis gene clusters(Koranimine and Carotenoid),and two antibiotic gene clusters with similarities of only 23%and 13%(Synechobactin and Surfactin),respectively.Additionally,one bacteriocin-encoding gene cluster was discovered,corresponding to the product Sactipeptides.Through evolutionary genealogy of genes:non-supervised orthologous groups(eggNOG)database annotation,amino acid metabolism and carbohydrate metabolism were found to be the main metabolic functions of this strain.Meanwhile,a total of 16 selenium-related protein genes were predicted in the N-5 genome,which may be closely related to the selenium tolerance mechanism of this strain.These findings provide reference and insights for the development and utilization of selenium-enriched probiotic resources.

selenium-tolerantPriestia megateriumwhole-genome sequencingselenoprotein

檀艳萍、庞振斌、陈小玲、范诗悦、罗以杰、高超、董星星、何毅

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武汉轻工大学硒科学与工程现代产业学院/国家富硒农产品加工技术研发专业中心/湖北省绿色富硒农产品精深加工工程技术研究中心,湖北武汉 430023

中科生物技术转移(深圳)有限公司,广东深圳 518000

耐硒 巨大普里斯特氏菌 基因组 硒蛋白

湖北省自然科学基金项目湖北省教育厅科学技术研究项目武汉轻工大学校企合作横向课题

2022CFB945Q20211612whpu-2023-kj-2339

2024

食品科技
北京市粮食科学研究所

食品科技

CSTPCD北大核心
影响因子:0.622
ISSN:1005-9989
年,卷(期):2024.49(6)
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