首页|基于新型高保真Taq酶的多重等位基因特异性PCR方法的建立与应用

基于新型高保真Taq酶的多重等位基因特异性PCR方法的建立与应用

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在 8 号染色体存在部分替换片段的小鼠上挑选 3 个SNP位点进行初步方案检验,包括高保真Taq酶的特异性测试以及引物浓度对分型结果的影响,并评价该方法的灵敏度;之后应用该技术检测野生 1 号染色体替换系小鼠上的 9 个SNP的不同样本.对Taq酶的特异性研究表明:引物在未引入突变的前提下检测结果与测序结果保持一致;引物稀释实验说明浓度最低为0.003~0.006 μmol/L,灵敏度的检测结果表示最低浓度检测限可达 0.07 ng/μL以下.最后检测得到 5 种标准样本的基因型,其代表 9 个SNP的组合.成功验证并建立该新型高特异性Taq酶应用于多重等位基因特异性PCR实验的总体流程.提供一套具备高特异性、能够针对多个SNP位点进行检测的低成本方案,对多重等位基因特异性PCR技术的开发同样具有参考价值.
Establishment and application of a multiple allele-specific PCR method based on a novel high-fidelity Taq polymerase
This technology was established on the basis of three selected SNP loci for preliminary testing on mice with partially re-placed fragments on chromosome 8,including specificity testing of high-fidelity Taq enzymes and evaluation of the effect of primer con-centration on genotyping results as well as sensitivity assessment.It was used to detect nine SNPs in different wild-type chromosome 1 substitution mouse samples.The study showed that the detection results without introducing mutations into primers were consistent with sequencing results.The dilution experiments indicated that the optimal concentration was at least 0.003-0.006 μmol/L,while sensitivity detection revealed that the minimal concentration detection limit could reach below 0.07 ng/μL.Finally,five standard sam-ples'genotypes representing combinations of nine SNPs were detected.The overall process for applying this highly specific Taq enzyme in multiple allele-specific PCR experiments was eventually validated and established.This article offered a low-cost solution with high specificity and the ability to detect multiple SNP loci,which preserved the reference value for the development of multiple allele-specif-ic PCR technology.

allele-specific PCRmultiplex PCRhigh-fidelity Taq enzymegenotypechromosome substitution mice

沈泽嘉、徐逸梦、时景景、周宇荀、李凯、肖君华

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东华大学 生物医学工程学院, 上海 201620

等位基因特异性PCR 多重PCR 高保真Taq酶 基因分型 染色体替换系小鼠

国家自然科学基金上海市科委项目

3177255017140903102

2024

生物学杂志
合肥市科学技术协会

生物学杂志

CSTPCD北大核心
影响因子:0.554
ISSN:2095-1736
年,卷(期):2024.41(2)
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