药学学报2024,Vol.59Issue(3) :633-642.DOI:10.16438/j.0513-4870.2023-0904

基于网络药理学与分子对接的金线莲液抗COVID-19作用机制研究

Anti-COVID-19 mechanism of Anoectochilus roxburghii liquid based on network pharmacology and molecular docking

朱瑾 吴岩斌 黄德福 白冰珂 何旭辉 贾丹 郑承剑
药学学报2024,Vol.59Issue(3) :633-642.DOI:10.16438/j.0513-4870.2023-0904

基于网络药理学与分子对接的金线莲液抗COVID-19作用机制研究

Anti-COVID-19 mechanism of Anoectochilus roxburghii liquid based on network pharmacology and molecular docking

朱瑾 1吴岩斌 2黄德福 3白冰珂 1何旭辉 1贾丹 1郑承剑4
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作者信息

  • 1. 海军军医大学药学系,上海 200433
  • 2. 福建中医药大学药学院,福建福州 350122
  • 3. 福建医科大学孟超肝胆医院,福建福州 350025
  • 4. 海军军医大学药学系,上海 200433;道地药材国家重点实验室,北京 100700
  • 折叠

摘要

金线莲液(喷雾用)在COVID-19大流行期间表现出良好的临床治疗效果,但其物质基础及作用机制尚不明确.本研究拟通过网络药理学及分子对接的方法预测金线莲液防治新冠的分子机制,结合体外药效学实验对当前具有明确新冠防治效果的靶点与金线莲液重点成分的相互作用进行研究.首先运用UPLC-MS结合数据库比对分析金线莲液中活性成分,经SwissADME数据库体内药代动力学过程筛选得到类药性较好的潜在活性成分17个,SwissTargetPrediction、GeneCards检索获得化合物疾病共有靶点93个.随后运用Cytoscape 3.8.2软件构建"成分-靶点"网络图,以Metascape平台进行基因功能注释和富集通路分析,发现金线莲液主要通过异鼠李素、山柰酚、木犀草素、槲皮素、芹菜素等活性成分与共有靶点(NOS3、MPO、MMP3等)结合,调节对外部刺激的积极反应、炎症反应、细胞因子产生等生物过程,发挥抗COVID-19的作用.血管紧张素转换酶2(angiotensin-converting enzyme 2,ACE2)活性测定实验表明金线莲液(喷雾用)原液及除去多糖后的上清液(主要为黄酮类成分)对ACE2酶活性有一定的抑制作用.最后,采用2019-nCOV-S蛋白假病毒感染HEK-293T-ACE2细胞,发现金线莲液可能主要通过阻断新冠病毒S蛋白与ACE2的结合发挥抗病毒作用.

Abstract

Anoectochilus roxburghii liquid(spray,a hospital preparation of Wu Mengchao Hepatobiliary Hospital of Fujian Medical University)has shown a good clinical treatment effect during the COVID-19 pandemic,but its material basis and mechanism of action are still unclear.In this study,network pharmacology and molecular docking methods were used to predict the molecular mechanism of A.roxburghii liquid against COVID-19,and pharmacodynamic experiments in vitro were conducted to study the interaction between the current targets with clear preventive and therapeutic effects and the key components of A.roxburghii liquid.UPLC-MS and database were used to compare and analyze the active ingredients in the liquid,and 17 potential active ingredients with good drug-like properties were screened by in vivo pharmacokinetics process in SwissADME database.SwissTargetPrediction and GeneCards were searched to find 93 common targets.Cytoscape 3.8.2 software was used to construct the"component-target"network map,and the Metascape platform was used for gene function annotation and pathway enrichment analysis.It was found that the extract could regulate the positive response to external stimuli,inflammatory response,cytokine production and other biological processes by binding the active ingredients such as isorhamnetin,kaempferol,luteolin,quercetin and apigenin to the common targets(NOS3,MPO,MMP3,etc.),and play an anti-COVID-19 role.In the angiotensin-converting enzyme 2(ACE2)activity inhibition assay,it was found that the stock solution of A.roxburghii liquid(for spray),and the supernatant after removing polysaccharides(mainly containing flavonoids)could to some extent inhibit the activity of ACE2.Crucially,in the experiment of 2019-nCOV-S pseudovirus infecting HEK-293T-ACE2 cells,we found that A.roxburghii liquid may exert anti-COVID-19 effects by blocking the binding of SARS-CoV-S protein to ACE2.

关键词

金线莲液(喷雾用)/COVID-19/网络药理学/分子靶点对接/作用机制

Key words

Anoectochilus roxburghii liquid(for spray)/COVID-19/network pharmacology/molecular docking/mechanism

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基金项目

国家自然科学基金(82174081)

国家自然科学基金(82374118)

国家自然科学基金(82004002)

上海市浦江人才计划(21PJD082)

中央本级重大增减支项目(2060302)

出版年

2024
药学学报
中国药学会 中国医学科学院药物研究所

药学学报

CSTPCD北大核心
影响因子:1.274
ISSN:0513-4870
参考文献量22
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