中国动物检疫2024,Vol.41Issue(12) :89-94.DOI:10.3969/j.issn.1005-944X.2024.12.015

类 NADC30与类NADC34 PRRSV双重qPCR检测方法的建立与应用

Establishment and Application of a Duplex qPCR for NADC30-like and NADC34-like PRRSV

马明洋 佘文轩 安川叶 张晶晶 杨紫烨 殷笑妍 杜叶 朱瑞冰 韩冬梅 刘冠慧
中国动物检疫2024,Vol.41Issue(12) :89-94.DOI:10.3969/j.issn.1005-944X.2024.12.015

类 NADC30与类NADC34 PRRSV双重qPCR检测方法的建立与应用

Establishment and Application of a Duplex qPCR for NADC30-like and NADC34-like PRRSV

马明洋 1佘文轩 1安川叶 2张晶晶 3杨紫烨 1殷笑妍 1杜叶 1朱瑞冰 1韩冬梅 1刘冠慧1
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作者信息

  • 1. 河北工程大学,河北邯郸 056038
  • 2. 牧大基因(河北)科技有限公司,河北石家庄 051530
  • 3. 邯郸市动物疫病预防控制中心,河北邯郸 056001
  • 折叠

摘要

近年来,类NADC30和类NADC34猪繁殖与呼吸综合征病毒(PRRSV)给养猪业带来了严重经济损失.为实现类NADC30和类NADC34 PRRSV的同时检测,针对PRRSV经典毒株、高致病性毒株、类NADC30毒株和类NADC34毒株ORF5基因的明显差异区域序列,设计引物与探针,经优化引物和探针浓度及退火温度,建立了类NADC30和类NADC34 PRRSV双重qPCR检测方法,并对该方法的特异性、敏感性和重复性进行评估,比较该方法与文献报道方法对临床样本检测结果的一致性.结果显示:本研究建立的双重qPCR方法仅对类NADC30和类NADC34 PRRSV核酸扩增呈阳性,而对其他常见猪病病原均无扩增,且类NADC30与类NADC34 PRRSV检测方法之间无交叉反应;对类NADC30和类NADC34 PRRSV核酸的最低检测限分别为1和10 copies/μL,组内及组间试验变异系数均小于2%;该方法与文献报道方法对类NADC30和类NADC34 PRRSV检测结果的符合率分别为89.5%和92.9%.结果表明,本研究建立的双重qPCR方法特异性好、灵敏度高、稳定性佳,能够有效区分类NADC30和类NADC34 PRRSV,为猪繁殖与呼吸综合征诊断和流行病学调查提供了技术支撑.

Abstract

In recent years,NADC30-like and NADC34-like porcine reproductive and respiratory syndrome viruses(PRRSV)have caused serious economic loss to pig industry.In order to simultaneously detect NADC30-like and NADC34-like PRRSV,primers and probes were designed based on the region with obvious difference of ORF5 genes of classical strains,highly pathogenic strains,NADC30-like and NADC34-like strains.The concentration of primers and probes as well as annealing temperature were optimized to establish a duplex qPCR for NADC30-like and NADC34-like PRRSV,followed by evaluation of its specificity,sensitivity and repeatability to compare the results of clinical samples by the established method with those by the method reported in documentations.The results showed that the established method was positive only for the amplification of NADC30-like and NADC34-like PRRSV nucleic acids,but failed for other common pig pathogens,and no cross-reaction was found between the detection for NADC30-like and NADC34-like PRRSV;the minimum detection limits for NADC30-like and NADC34-like PRRSV were 1 and 10 copies/μL,respectively,and the intra-and inter-group coefficients of variation were both less than 2%;the results by the established method for NADC30-like and NADC34-like PRRSV were 89.5%and 92.9%coincident with those by the method reported in documentations,respectively.In conclusion,the duplex qPCR established in this study could be used to effectively distinguish NADC30-like from NADC34-like PRRSV with its advantages of high specificity,sensitivity and stability,supporting the diagnosis and epidemiological investigation for the disease.

关键词

类NADC30/PRRSV/类NADC34/PRRSV/双重qPCR/建立及应用

Key words

NADC30-like PRRSV/NADC34-like PRRSV/duplex qPCR/establishment and application

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出版年

2024
中国动物检疫
中国动物卫生与流行病学中心

中国动物检疫

影响因子:0.437
ISSN:1005-944X
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